RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ZNF667Q5HYK9 610 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 PPP1R2P3Q6NXS1 205 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 DSTYKQ6XUX3 929 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 POLNQ7Z5Q5 900 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 ANKRD36BP1Q96IX9 119 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 TSSK1BQ9BXA7 367 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 UGT1A7Q9HAW7 530 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 UGT1A10Q9HAW8 530 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 UGT1A8Q9HAW9 530 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 HOXC10Q9NYD6 342 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 DONSONQ9NYP3 566 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 STRIP2Q9ULQ0 834 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 PHIPQ8WWQ0 1821 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 E5RJQ4 531 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 RGS7P49802 495 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 TAP1Q03518 808 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 ZBTB16Q05516 673 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 PARP6Q2NL67 630 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 MDH1BQ5I0G3 518 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 ATF7IP2Q5U623 682 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 PPM1NQ8N819 430 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 C1orf127Q8N9H9 656 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 SLC4A11Q8NBS3 891 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 SLC24A3Q9HC58 644 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 PIM2Q9P1W9 311 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 IKBKGQ9Y6K9 419 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 CCDC195A0A1B0GUA6 201 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 C2CD2LO14523 706 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 NEBLO76041 1014 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 TPBGLP0DKB5 382 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 TROVE2P10155 538 aaKnown RBP eCLIP25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 ICAM3P32942 547 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 SLC18A1P54219 525 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 KLHL38Q2WGJ6 581 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 ZBTB8OSQ8IWT0 167 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 FAF2Q96CS3 445 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 HEXIM2Q96MH2 286 aaKnown RBP25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 ADPGKQ9BRR6 497 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 DHRS4Q9BTZ2 278 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 RAB6BQ9NRW1 208 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 NR2E3Q9Y5X4 410 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 CXorf49A8MYA2 514 aaPredicted RBP25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 TRUB2O95900 331 aaKnown RBP25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 CALB2P22676 271 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 BMPR2Q13873 1038 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 KHDC1Q4VXA5 237 aaKnown RBP25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 APBB1IPQ7Z5R6 666 aaPredicted RBP25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 SEPT1Q8WYJ6 367 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 CAMKK2Q96RR4 588 aa25.47■■□□□ 1.67
SPTSSA-201ENST00000298130 FAM237BA0A1B0GVD1 139 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 RNF8O76064 485 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 TRPM4Q8TD43 1214 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 TMEM120AQ9BXJ8 343 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 CADM1Q9BY67 442 aaKnown RBP25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 MAGEB5Q9BZ81 275 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 SLC13A1Q9BZW2 595 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 ZBTB42B2RXF5 422 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 APOC4-APOC2K7ER74 178 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 ATP5HO75947 161 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 APOC2P02655 101 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 INHBAP08476 426 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 PDHA1P08559 390 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 YY1P25490 414 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 SLC45A4Q5BKX6 768 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 ZC3H12AQ5D1E8 599 aaKnown RBP25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 DEFB132Q7Z7B7 95 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 C12orf29Q8N999 325 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 STK32AQ8WU08 396 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 CYTH2Q99418 400 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 PARP14Q460N5 1801 aa25.46■■□□□ 1.67
SPTSSA-201ENST00000298130 GPR25O00155 361 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 TOP3BO95985 862 aaKnown RBP25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 GNAZP19086 355 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 EFNA5P52803 228 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 ARFIP2P53365 341 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 ROR1Q01973 937 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 FAM160B1Q5W0V3 765 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 MAP1SQ66K74 1059 aaPredicted RBP25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 MAB21L3Q8N8X9 362 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 INPP5DQ92835 1189 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 RNF19AQ9NV58 838 aa25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 MARCOQ9UEW3 520 aaPredicted RBP25.45■■□□□ 1.67
SPTSSA-201ENST00000298130 E7ESA3 106 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 KCNN4O15554 427 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 KITP10721 976 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 AP3M2P53677 418 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 PTPN11Q06124 597 aaPredicted RBP25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 OR6B2Q6IFH4 312 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 MPZL3Q6UWV2 235 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 TTC13Q8NBP0 860 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 KLRG1Q96E93 195 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 NAF1Q96HR8 494 aaKnown RBP25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 CPB2Q96IY4 423 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 TRIM55Q9BYV6 548 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 KCNK13Q9HB14 408 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 ZNF112Q9UJU3 913 aa25.45■■□□□ 1.66
SPTSSA-201ENST00000298130 LACTBL1A8MY62 500 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 CYB561D2O14569 222 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 PTPN4P29074 926 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 ZNF200P98182 395 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms