RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 STX3Q13277 289 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 TAF5Q15542 800 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 MAP7D3Q8IWC1 876 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 MIPEPQ99797 713 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 KLC2Q9H0B6 622 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 ACSS3Q9H6R3 686 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 APOBEC2Q9Y235 224 aaKnown RBP13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 TCRBV9S1A1TA0A576 114 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 TMEM63AO94886 807 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 MMP8P22894 467 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 AMPD1P23109 780 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 OGDHQ02218 1023 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 BST1Q10588 318 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 ASPHQ12797 758 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 PYDC1Q8WXC3 89 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 VCPIP1Q96JH7 1222 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 VPS11Q9H270 941 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 PACSIN3Q9UKS6 424 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
TMEM200A-201ENST00000296978 PDE5AO76074 875 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 FGFR1P11362 822 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 ACADSP16219 412 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 SESN2P58004 480 aaPredicted RBP13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 HIC1Q14526 733 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 ZNF568Q3ZCX4 644 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 ZNF772Q68DY9 489 aaPredicted RBP13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 IRGCQ6NXR0 463 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 C16orf46Q6P387 395 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 PHF13Q86YI8 300 aaPredicted RBP13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 MIS12Q9H081 205 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 POLIQ9UNA4 740 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 E7ENQ6 273 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 WDR46O15213 610 aaKnown RBP13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 ETS2P15036 469 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 OSBPP22059 807 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 CDKN2BP42772 138 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 HMGCS2P54868 508 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 NXNQ6DKJ4 435 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 PIP4K2CQ8TBX8 421 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 APOPT1Q96IL0 206 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 ZNF184Q99676 751 aaPredicted RBP13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 C17orf75Q9HAS0 396 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 NRBP2Q9NSY0 501 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 CLUHO75153 1309 aa13.11□□□□□ -0.31
TMEM200A-201ENST00000296978 TRPA1O75762 1119 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 VNN1O95497 513 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 C4BPAP04003 597 aaKnown RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 HSD17B4P51659 736 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 TRIP10Q15642 601 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 EFHC2Q5JST6 749 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 PPCSQ9HAB8 311 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 RIPK3Q9Y572 518 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 MED7O43513 233 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 ITGAVP06756 1048 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 GCAP28676 217 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 MIPP30301 263 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 SLC25A3Q00325 362 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 UBAP2LQ14157 1087 aaKnown RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 TFDP2Q14188 446 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 CIAPIN1Q6FI81 312 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 CCNYQ8ND76 341 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 USP6NLQ92738 828 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 ASNSD1Q9NWL6 643 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 DRG1Q9Y295 367 aaKnown RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 LRRC42Q9Y546 428 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 TYROBPO43914 113 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 KDELR1P24390 212 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 CUL3Q13618 768 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 RBM15BQ8NDT2 890 aaKnown RBP13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 ANKRD27Q96NW4 1050 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
TMEM200A-201ENST00000296978 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
TMEM200A-201ENST00000296978 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
TMEM200A-201ENST00000296978 DSG1Q02413 1049 aa13.09□□□□□ -0.31
TMEM200A-201ENST00000296978 SGSM1Q2NKQ1 1148 aa13.09□□□□□ -0.31
TMEM200A-201ENST00000296978 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
TMEM200A-201ENST00000296978 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms