RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CEP295NLQ96MC4 621 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 KCND1Q9NSA2 647 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
RFC4-201ENST00000296273 STK17AQ9UEE5 414 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 EXOC7Q9UPT5 735 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 SPAG17Q6Q759 2223 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 OBSL1O75147 1896 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 ANK1P16157 1881 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 SCN1AP35498 2009 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 C1QTNF9BB2RNN3 333 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ALDH1A2O94788 518 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ITGB3P05106 788 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 C1QTNF9P0C862 333 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 PLCG1P19174 1290 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 CYP2F1P24903 491 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 PCSK1P29120 753 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 POLR2BP30876 1174 aaKnown RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 DPP6P42658 865 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 UBASH3AP57075 661 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 LMAN2Q12907 356 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 FOXC1Q12948 553 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 HSF5Q4G112 596 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ZNF658Q5TYW1 1059 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 SDHAF4Q5VUM1 108 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 C4orf50Q6ZRC1 276 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 USP49Q70CQ1 688 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 DPH6Q7L8W6 267 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 CYP2U1Q7Z449 544 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 LRRC8AQ8IWT6 810 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ANKRD20A12PQ8NF67 263 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 SH3RF2Q8TEC5 729 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ADAM33Q9BZ11 813 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 KBTBD4Q9NVX7 518 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 GDAP2Q9NXN4 497 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 EHD2Q9NZN4 543 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 GCNT4Q9P109 453 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 SEL1LQ9UBV2 794 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 EVLQ9UI08 416 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 GTF3C4Q9UKN8 822 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ITGA11Q9UKX5 1188 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 MMP17Q9ULZ9 603 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 WNT6Q9Y6F9 365 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 USP24Q9UPU5 2620 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 TISP43B9A030 160 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 GABRDO14764 452 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 HDCP19113 662 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 CDK11BP21127 795 aaKnown RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 ADSSP30520 456 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 MAGEA11P43364 429 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 CRY1Q16526 586 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 NAIF1Q69YI7 327 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 VSTM1Q6UX27 236 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 BRSK2Q8IWQ3 736 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 TOP6BLQ8N6T0 577 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 ARL14EPQ8N8R7 260 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 STKLD1Q8NE28 680 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 TTC16Q8NEE8 873 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 NOC3LQ8WTT2 800 aaKnown RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 ERCC4Q92889 916 aaPredicted RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 SLC22A12Q96S37 553 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 CYP2S1Q96SQ9 504 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 PKMYT1Q99640 499 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
RFC4-201ENST00000296273 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 RWDD2AQ9UIY3 292 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 WASF3Q9UPY6 502 aa11.28□□□□□ -0.6
RFC4-201ENST00000296273 K7EQS6 105 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
RFC4-201ENST00000296273 GIPC1O14908 333 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 PPP1R37O75864 691 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 RPN1P04843 607 aaKnown RBP11.27□□□□□ -0.61
RFC4-201ENST00000296273 ZNF18P17022 549 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 GARTP22102 1010 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 ACAT1P24752 427 aaKnown RBP11.27□□□□□ -0.61
RFC4-201ENST00000296273 OPRD1P41143 372 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 EIF2DP41214 584 aaKnown RBP11.27□□□□□ -0.61
RFC4-201ENST00000296273 PPP3CCP48454 512 aa11.27□□□□□ -0.61
RFC4-201ENST00000296273 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
RFC4-201ENST00000296273 RBP5P82980 135 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms