RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RAET1EQ8TD07 263 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 UBLCP1Q8WVY7 318 aaPredicted RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 SENP8Q96LD8 212 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 HSFY1Q96LI6 401 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 FAM118BQ9BPY3 351 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 C11orf84Q9BUA3 381 aaPredicted RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 FRMD8P1Q9BZ68 369 aaPredicted RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 CACNG4Q9UBN1 327 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 DNPEPQ9ULA0 475 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 DNAH12Q6ZR08 3092 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 COL4A4P53420 1690 aaPredicted RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 PATJQ8NI35 1801 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 GOLGA6CA6NDK9 693 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 INPPL1O15357 1258 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 NUDT17P0C025 328 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 GOLGA6DP0CG33 693 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 PTPN9P43378 593 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 CLCNKBP51801 687 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 PMS2P54278 862 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 CAV1Q03135 178 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 BYSLQ13895 437 aaKnown RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 TAF5Q15542 800 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 C15orf59Q2T9L4 293 aaPredicted RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 SH3PXD2AQ5TCZ1 1133 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 TRAF7Q6Q0C0 670 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 ALLCQ8N6M5 410 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 CCDC89Q8N998 374 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 SLC43A3Q8NBI5 491 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 TEKT4Q8WW24 435 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 NCAPGQ9BPX3 1015 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 B3GNT5Q9BYG0 378 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 PABPC3Q9H361 631 aaKnown RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 RSAD1Q9HA92 442 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 GOLGA6AQ9NYA3 693 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 PCSK1NQ9UHG2 260 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 DRG1Q9Y295 367 aaKnown RBP10.67□□□□□ -0.7
C9orf43-201ENST00000288462 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
C9orf43-201ENST00000288462 GRAP2O75791 330 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 INHAP05111 366 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ITGAVP06756 1048 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CD48P09326 243 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 PTPN1P18031 435 aaKnown RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 SDC4P31431 198 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 MAP2K2P36507 400 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 APLP1P51693 650 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 GRIK3Q13003 919 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 SLMAPQ14BN4 828 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 UPP1Q16831 310 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 RAB6CQ53S08 254 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CEP85LQ5SZL2 805 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 KIAA0319Q5VV43 1072 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 LHX8Q68G74 356 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 PAQR9Q6ZVX9 377 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ZNF598Q86UK7 904 aaKnown RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 SCUBE3Q8IX30 993 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 FAM76AQ8TAV0 307 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 PKNOX2Q96KN3 472 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CFAP57Q96MR6 1250 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 GLT1D1Q96MS3 346 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 DUSP16Q9BY84 665 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 RAB6CQ9H0N0 254 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 TMBIM4Q9HC24 238 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 PTPRDP23468 1912 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ATP2C2O75185 946 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 SKIP12755 728 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 RARGP13631 454 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 NPR3P17342 541 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ACAT1P24752 427 aaKnown RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 LHX1P48742 406 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 EIF3BP55884 814 aaKnown RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 PLCB3Q01970 1234 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CCDC142Q17RM4 750 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 BBOF1Q8ND07 529 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 OR2W6PQ8NHA6 318 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 SPATA18Q8TC71 538 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CCHCR1Q8TD31 782 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CLEC4CQ8WTT0 213 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 FAM172AQ8WUF8 416 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 HSPH1Q92598 858 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CENPIQ92674 756 aaPredicted RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 PGBD4Q96DM1 585 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 TBCBQ99426 244 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 ADAM2Q99965 735 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 UBN1Q9NPG3 1134 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 CRTAC1Q9NQ79 661 aa10.66□□□□□ -0.7
C9orf43-201ENST00000288462 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 DDX43Q9NXZ2 648 aaKnown RBP10.66□□□□□ -0.7
C9orf43-201ENST00000288462 NLRC5Q86WI3 1866 aa10.65□□□□□ -0.7
C9orf43-201ENST00000288462 A0A1W2PQ45 241 aaPredicted RBP10.65□□□□□ -0.7
C9orf43-201ENST00000288462 A0A1W2PQY0 241 aa10.65□□□□□ -0.7
C9orf43-201ENST00000288462 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
C9orf43-201ENST00000288462 MDM4O15151 490 aa10.65□□□□□ -0.7
C9orf43-201ENST00000288462 PRPSAP2O60256 369 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms