RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 PTPRJQ12913 1337 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 INO80B-WBP1J3KQ70 363 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 AGPSO00116 658 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 C22orf31O95567 290 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 LGALS2P05162 132 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 CALB1P05937 261 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 MCF2P10911 925 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 GNAT1P11488 350 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 MNX1P50219 401 aaPredicted RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 TAP1Q03518 808 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 CYP1B1Q16678 543 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 MON1BQ7L1V2 547 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 ZBTB33Q86T24 672 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 TRIM50Q86XT4 487 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 TMEM151BQ8IW70 566 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 LRRC71Q8N4P6 559 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 UBR7Q8N806 425 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 ALG3Q92685 438 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 NLRP4Q96MN2 994 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 GDAP1L1Q96MZ0 367 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 NR1H4Q96RI1 486 aaPredicted RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 C16orf70Q9BSU1 422 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 RPF1Q9H9Y2 349 aaKnown RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 APOBEC3GQ9HC16 384 aaKnown RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 AMACRQ9UHK6 382 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF148Q9UQR1 794 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 MKI67P46013 3256 aaKnown RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 THAP12O43422 761 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 PSTPIP1O43586 416 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 EDN1P05305 212 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 MMP3P08254 477 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 RARBP10826 455 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CETN2P41208 172 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 WNT7BP56706 349 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 NOMO3P69849 1222 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 MBTD1Q05BQ5 628 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ZBTB41Q5SVQ8 909 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 IQCKQ8N0W5 287 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 OR5B17Q8NGF7 314 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC110Q8TBZ0 833 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 DEFB118Q96PH6 123 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ERP44Q9BS26 406 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 RNF208Q9H0X6 261 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 PLEKHA4Q9H4M7 779 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ASB7Q9H672 318 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ACP6Q9NPH0 428 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 XPNPEP3Q9NQH7 507 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 PARVAQ9NVD7 372 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 GALNT8Q9NY28 637 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ADAM22Q9P0K1 906 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ESYT3A0FGR9 886 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 M0QX08 132 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 MED7O43513 233 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ITGA4P13612 1032 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 P4HA1P13674 534 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CD9P21926 228 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 MRPS25P82663 173 aaKnown RBP7.93□□□□□ -1.14
TRIM42-201ENST00000286349 LRP8Q14114 963 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 LBRQ14739 615 aaKnown RBP7.93□□□□□ -1.14
TRIM42-201ENST00000286349 PCBP1Q15365 356 aaKnown RBP eCLIP7.93□□□□□ -1.14
TRIM42-201ENST00000286349 KCNA10Q16322 511 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF699Q32M78 642 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC14Q49A88 953 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CFAP157Q5JU67 520 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 NAA35Q5VZE5 725 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 NXNQ6DKJ4 435 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 SPOPLQ6IQ16 392 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC121Q6ZUS5 278 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 SYDE1Q6ZW31 735 aaPredicted RBP7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF410Q86VK4 478 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 SLC13A5Q86YT5 568 aaPredicted RBP7.93□□□□□ -1.14
TRIM42-201ENST00000286349 GDAP1Q8TB36 358 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 TBC1D20Q96BZ9 403 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CYFIP2Q96F07 1278 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 C8orf48Q96LL4 319 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 CGREF1Q99674 301 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 MTMR12Q9C0I1 747 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 YIPF3Q9GZM5 350 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 RNPEPQ9H4A4 650 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 PCDHGC3Q9UN70 934 aa7.93□□□□□ -1.14
TRIM42-201ENST00000286349 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
TRIM42-201ENST00000286349 ZSCAN5CA6NGD5 496 aaPredicted RBP7.92□□□□□ -1.14
TRIM42-201ENST00000286349 C2orf81A6NN90 581 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 ATMINO43313 823 aaPredicted RBP7.92□□□□□ -1.14
TRIM42-201ENST00000286349 TSPAN1O60635 241 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF254O75437 659 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 PROSCO94903 275 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 INSRRP14616 1297 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 TNFSF9P41273 254 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 HALP42357 657 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 TFAMQ00059 246 aaKnown RBP7.92□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF211Q13398 564 aaPredicted RBP7.92□□□□□ -1.14
TRIM42-201ENST00000286349 HIC1Q14526 733 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 FSCN1Q16658 493 aaKnown RBP7.92□□□□□ -1.14
TRIM42-201ENST00000286349 DUPD1Q68J44 220 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 PLEKHA7Q6IQ23 1121 aa7.92□□□□□ -1.14
TRIM42-201ENST00000286349 LLGL2Q6P1M3 1020 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms