RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 EPS8Q12929 822 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 RASSF6Q6ZTQ3 369 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 EFCAB1Q9HAE3 211 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 NAGPAQ9UK23 515 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 A0A0X1KG70 313 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 CHN1P15882 459 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 IFNAR1P17181 557 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 CCR4P51679 360 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 EID3Q8N140 333 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 ATP9AO75110 1047 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 ACADSP16219 412 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 RIBC1Q8N443 379 aaPredicted RBP13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 C3orf20Q8ND61 904 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 CENPIQ92674 756 aaPredicted RBP13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 SERAC1Q96JX3 654 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 MANSC1Q9H8J5 431 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 MAGEA13PA6NCF6 341 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 TSPAN19P0C672 248 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 ITIH2P19823 946 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 MSH3P20585 1137 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 E2F7Q96AV8 911 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 LXNQ9BS40 222 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 GMEB1Q9Y692 573 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 H7C1W4 665 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 ALOX12P18054 663 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 ZNF846Q147U1 533 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 SMYD1Q8NB12 490 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
SMARCA5-201ENST00000283131 ARAP1Q96P48 1450 aa13.65□□□□□ -0.23
SMARCA5-201ENST00000283131 ERBB3P21860 1342 aa13.65□□□□□ -0.23
SMARCA5-201ENST00000283131 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TEX46H3BTG2 121 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 SLC2A3P11169 496 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 ALDH7A1P49419 539 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 SIK1P57059 783 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 RESTQ13127 1097 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 FAM220AQ7Z4H9 259 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 C4orf33Q8N1A6 199 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 BHMTQ93088 406 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 GAL3ST3Q96A11 431 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 MIEF2Q96C03 454 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 GSTK1Q9Y2Q3 226 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 IDH3BO43837 385 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 RARBP10826 455 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 ITGA4P13612 1032 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NFYCQ13952 458 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 MZT2BQ6NZ67 158 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TMEM26Q6ZUK4 368 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 MCEEQ96PE7 176 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 ACAD9Q9H845 621 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TRIM49D1C9J1S8 452 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NOL9Q5SY16 702 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NSUN7Q8NE18 718 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 AGPAT1Q99943 283 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 CMTM6Q9NX76 183 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 VTI1BQ9UEU0 232 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 FBXO10Q9UK96 956 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TMA7Q9Y2S6 64 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TNFRSF21O75509 655 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 PRKCBP05771 671 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 PARNO95453 639 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NCAM1P13591 858 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 VAC14Q08AM6 782 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 STARD3Q14849 445 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 LONRF1Q17RB8 773 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 CCSAPQ6IQ19 270 aaPredicted RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NCF1BA6NI72 391 aaPredicted RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NCF1CA8MVU1 366 aaPredicted RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TMEM114B3SHH9 223 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 STX16-NPEPL1H3BU86 382 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 STX16O14662 325 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 NCF1P14598 390 aaPredicted RBP13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 ABRAXAS1Q6UWZ7 409 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 MED8Q96G25 268 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 ADAM33Q9BZ11 813 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 SLC35C2Q9NQQ7 365 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 ZSWIM5Q9P217 1185 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 SNX13Q9Y5W8 968 aa13.64□□□□□ -0.23
SMARCA5-201ENST00000283131 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 PHF2O75151 1096 aa13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 MDH1P40925 334 aaKnown RBP13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 CRKLP46109 303 aaKnown RBP13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 SERPINB8P50452 374 aa13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 EIF2S3LQ2VIR3 472 aaKnown RBP13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 ALKBH2Q6NS38 261 aa13.63□□□□□ -0.23
SMARCA5-201ENST00000283131 DSG4Q86SJ6 1040 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms