RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 CCDC189A1A4V9 331 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 KBTBD13C9JR72 458 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 PRKAB2O43741 272 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 GUCY1B2O75343 617 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FDX1P10109 184 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USPL1Q5W0Q7 1092 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 MYO1HQ8N1T3 1032 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 PPP1R10Q96QC0 940 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 EIF2AK1Q9BQI3 630 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 RACGAP1Q9H0H5 632 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SCUBE2Q9NQ36 999 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 MIEF1Q9NQG6 463 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 AHSPQ9NZD4 102 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 VPS51Q9UID3 782 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SSNA1O43805 119 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ANXA6P08133 673 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FAM58BPP0C7Q3 252 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 PCNAP12004 261 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 DDX39BQ13838 428 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ZBTB49Q6ZSB9 765 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 LPCAT2Q7L5N7 544 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 UTP15Q8TED0 518 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 REPS1Q96D71 796 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FRMD6Q96NE9 622 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CMTM6Q9NX76 183 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 KIF28PB7ZC32 967 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FUT11Q495W5 492 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SCARA3Q6AZY7 606 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 WDR62O43379 1518 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM114B3SHH9 223 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ARHGDIBP52566 201 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 DGKDQ16760 1214 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 C10orf120Q5SQS8 335 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SWSAP1Q6NVH7 229 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP33Q8TEY7 942 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TRAPPC9Q96Q05 1148 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM79Q9BSE2 394 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FKBP14Q9NWM8 211 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TAGLN3Q9UI15 199 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 MAP1BP46821 2468 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CDC40O60508 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TSPAN19P0C672 248 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 VAV1P15498 845 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TKTP29401 623 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CBFBQ13951 182 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 RNF149Q8NC42 400 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ELOVL6Q9H5J4 265 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SNX8Q9Y5X2 465 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ETFBP38117 255 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FMO5P49326 533 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ACLYP53396 1101 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CYP24A1Q07973 514 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SLC18A3Q16572 532 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 EID3Q8N140 333 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TRPV3Q8NET8 790 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FAM192AQ9GZU8 254 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TRIT1Q9H3H1 467 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 NOL6Q9H6R4 1146 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ZSWIM5Q9P217 1185 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 UTYO14607 1347 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 PHGDHO43175 533 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TFE3P19532 575 aaPredicted RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TPP2P29144 1249 aaPredicted RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 EIF2S3P41091 472 aaKnown RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ALDH1A3P47895 512 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 GNA13Q14344 377 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 MAPK11Q15759 364 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L6PQ6QN14 398 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CCNJLQ8IV13 435 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 CCDC36Q8IYA8 594 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 RORBQ92753 470 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ZBTB10Q96DT7 871 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 PCDHA10Q9Y5I2 948 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 TTC37Q6PGP7 1564 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 RBP1P09455 135 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FGRP09769 529 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ITGALP20701 1170 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ITGA8P53708 1063 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ARF5P84085 180 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 ITGA9Q13797 1035 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 MROH9Q5TGP6 573 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 MZT2AQ6P582 158 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 SYTL1Q8IYJ3 562 aa9.01□□□□□ -0.97
NIPBL-201ENST00000282516 FAM71DQ8N9W8 422 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms