RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 VDRP11473 427 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 ASPAP45381 313 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 MCL1Q07820 350 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PPP1R26Q5T8A7 1209 aaPredicted RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PAF1Q8N7H5 531 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PIWIL1Q96J94 861 aaKnown RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 TMEM237Q96Q45 408 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 NOD1Q9Y239 953 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 L3MBTL1Q9Y468 752 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 CXCL11O14625 94 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 SNX3O60493 162 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 CDKN2BP42772 138 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 CRADDP78560 199 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 MPP2Q14168 576 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 WDTC1Q8N5D0 677 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 DEPDC1BQ8WUY9 529 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 SEC14L1Q92503 715 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 RSAD1Q9HA92 442 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 HAO1Q9UJM8 370 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 BARX2Q9UMQ3 279 aaPredicted RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PPP2R3BQ9Y5P8 575 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 COL2A1P02458 1487 aaPredicted RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 KBTBD13C9JR72 458 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 CPA2P48052 419 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 KCNJ2P63252 427 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 MORF4L2Q15014 288 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 SLC10A6Q3KNW5 377 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 FNBP1LQ5T0N5 605 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 SLC4A11Q8NBS3 891 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 AGR3Q8TD06 166 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 DNAI2Q9GZS0 605 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 MROH8Q9H579 483 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PCDH9Q9HC56 1237 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 CYTH4Q9UIA0 394 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 TNFSF13BQ9Y275 285 aa12.38□□□□□ -0.43
SLC13A3-201ENST00000279027 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 GNL1P36915 607 aaPredicted RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 SNX16P57768 344 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 LGSNQ5TDP6 509 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 ATXN2LQ8WWM7 1075 aaKnown RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 SIK2Q9H0K1 926 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 AP5M1Q9H0R1 490 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 TUBGCP4Q9UGJ1 667 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 FAM155BO75949 473 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 MAP2K2P36507 400 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 ZNF484Q5JVG2 852 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 CES3Q6UWW8 571 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 VSTM1Q6UX27 236 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 CYTH2Q99418 400 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 CNPY3Q9BT09 278 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 PCMTD2Q9NV79 361 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 ZNF831Q5JPB2 1677 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 CHUKO15111 745 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 AMPD1P23109 780 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 SULT1E1P49888 294 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 TARBP2Q15633 366 aaKnown RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 KLHL38Q2WGJ6 581 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 DSTYKQ6XUX3 929 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 DENND5BQ6ZUT9 1274 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 XYLT1Q86Y38 959 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 TCP10LQ8TDR4 215 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 HASPINQ8TF76 798 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 SMYD2Q9NRG4 433 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 SIX4Q9UIU6 781 aa12.37□□□□□ -0.43
SLC13A3-201ENST00000279027 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 PYGBP11216 843 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 FUKQ8N0W3 1084 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 SGSM3Q96HU1 749 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 APOL2Q9BQE5 337 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 EIF2AQ9BY44 585 aaKnown RBP12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 M0QZ92 97 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 STK10O94804 968 aaKnown RBP12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 ATG7O95352 703 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 C6orf222P0C671 652 aaPredicted RBP12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 DPYSL3Q14195 570 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 DGKDQ16760 1214 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 KBTBD12Q3ZCT8 623 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 TSHZ1Q6ZSZ6 1077 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 PLPPR4Q7Z2D5 763 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 PID1Q7Z2X4 250 aa12.36□□□□□ -0.43
SLC13A3-201ENST00000279027 USP33Q8TEY7 942 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms