RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 GYG2O15488 501 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 ERBB2P04626 1255 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 PDHA1P08559 390 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 KDELR1P24390 212 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 GDF10P55107 478 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 BEX3Q00994 111 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 OGDHQ02218 1023 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 CCDC14Q49A88 953 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
UBXN4-201ENST00000272638 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 GPC2Q8N158 579 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 C1orf127Q8N9H9 656 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 CCDC124Q96CT7 223 aaKnown RBP13.09□□□□□ -0.31
UBXN4-201ENST00000272638 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
UBXN4-201ENST00000272638 NOD2Q9HC29 1040 aa13.09□□□□□ -0.31
UBXN4-201ENST00000272638 MAFBQ9Y5Q3 323 aaPredicted RBP13.09□□□□□ -0.31
UBXN4-201ENST00000272638 NFASCO94856 1347 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 KCNK1O00180 336 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 IL18RAPO95256 599 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 MMP13P45452 471 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 ZNF280AP59817 542 aaPredicted RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 EML3Q32P44 896 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 HCRTO43612 131 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 AMPD1P23109 780 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 ALDH18A1P54886 795 aaKnown RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 hCG_1818297A0A087WSY0 165 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 PDHXO00330 501 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 LRCH4O75427 683 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 CIB2O75838 187 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 HAUS5O94927 633 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 EDN1P05305 212 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 ENO1P06733 434 aaKnown RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 BGNP21810 368 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 EPHX2P34913 555 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 ATXN1P54253 815 aaKnown RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 EPHB1P54762 984 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 TAF11Q15544 211 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 PHF13Q86YI8 300 aaPredicted RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 ARID3BQ8IVW6 561 aaPredicted RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 FUKQ8N0W3 1084 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.32
UBXN4-201ENST00000272638 SLC7A14Q8TBB6 771 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 PPP4R1Q8TF05 950 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 SLC5A4Q9NY91 659 aa13.08□□□□□ -0.32
UBXN4-201ENST00000272638 MAGEB2O15479 319 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 SNX3O60493 162 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 FAAP100Q0VG06 881 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 GRIK4Q16099 956 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 KBTBD12Q3ZCT8 623 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 PLEKHA7Q6IQ23 1121 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 ZCCHC23Q6ZST2 131 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 MTDHQ86UE4 582 aaKnown RBP13.07□□□□□ -0.32
UBXN4-201ENST00000272638 HACE1Q8IYU2 909 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 APPL2Q8NEU8 664 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 SPON1Q9HCB6 807 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 FAM155BO75949 473 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 VDRP11473 427 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 FAM183BPQ6ZVS7 135 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 PPFIBP2Q8ND30 876 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 MCUQ8NE86 351 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 CNPY3Q9BT09 278 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
UBXN4-201ENST00000272638 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
UBXN4-201ENST00000272638 GOLGA8TH3BQL2 631 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 ASAP2O43150 1006 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 XPOTO43592 962 aaKnown RBP13.07□□□□□ -0.32
UBXN4-201ENST00000272638 KRT38O76015 456 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 COPS2P61201 443 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 MORF4L2Q15014 288 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 LONP2Q86WA8 852 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■□□□ 12
UBXN4-201ENST00000272638 VCPIP1Q96JH7 1222 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 FBXL18Q96ME1 805 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 PCDH9Q9HC56 1237 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 IL1RAPL1Q9NZN1 696 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 ARMCX1Q9P291 453 aa13.07□□□□□ -0.32
UBXN4-201ENST00000272638 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
UBXN4-201ENST00000272638 M0QYT0 321 aa13.06□□□□□ -0.32
UBXN4-201ENST00000272638 MSCO60682 206 aa13.06□□□□□ -0.32
UBXN4-201ENST00000272638 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
UBXN4-201ENST00000272638 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
UBXN4-201ENST00000272638 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
UBXN4-201ENST00000272638 EIF4BP23588 611 aaKnown RBP13.06□□□□□ -0.32
UBXN4-201ENST00000272638 IL1R2P27930 398 aa13.06□□□□□ -0.32
UBXN4-201ENST00000272638 POU5F1Q01860 360 aaKnown RBP13.06□□□□□ -0.32
UBXN4-201ENST00000272638 NR1H3Q13133 447 aa13.06□□□□□ -0.32
UBXN4-201ENST00000272638 ZCCHC9Q8N567 271 aaKnown RBP13.06□□□□□ -0.32
UBXN4-201ENST00000272638 GBP7Q8N8V2 638 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms