RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 DYNLT1P63172 113 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 TCP10Q12799 353 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 MTMR2Q13614 643 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 TRIP10Q15642 601 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 RC3H1Q5TC82 1133 aaKnown RBP16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 KLC3Q6P597 504 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 TMEM179Q6ZVK1 233 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 MAP4K3Q8IVH8 894 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 ACTL9Q8TC94 416 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 KIFC3Q9BVG8 833 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 USP29Q9HBJ7 922 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 SIRPGQ9P1W8 387 aa16.06■□□□□ 0.16
SCAMP2-201ENST00000268099 TRIM49D1C9J1S8 452 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 KBTBD13C9JR72 458 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 GDF11O95390 407 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 GNA15P30679 374 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 RPL5P46777 297 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 CACNB3P54284 484 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 OTUD4Q01804 1114 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 FOLH1Q04609 750 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 TBL3Q12788 808 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 TMEM161BQ8NDZ6 487 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 RSAD2Q8WXG1 361 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 JADE3Q92613 823 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 CATSPER2Q96P56 530 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 BTBD9Q96Q07 612 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 SSX2IPQ9Y2D8 614 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 A0A0J9YVX5 310 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 EPHB1P54762 984 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 BRDTQ58F21 947 aaPredicted RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 RALGPS1Q5JS13 557 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 WDR44Q5JSH3 913 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 TTC39BQ5VTQ0 682 aaPredicted RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 APOBEC3HQ6NTF7 200 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 RBM17Q96I25 401 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 EBF4Q9BQW3 602 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 DDX56Q9NY93 547 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 SORCS3Q9UPU3 1222 aa16.05■□□□□ 0.16
SCAMP2-201ENST00000268099 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 SDR42E2A6NKP2 422 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 CSDE1O75534 798 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 FAM155BO75949 473 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 STK10O94804 968 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 ACO1P21399 889 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 YWHAGP61981 247 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 MRPS5P82675 430 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 FAM102BQ5T8I3 360 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 SPOPLQ6IQ16 392 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 KLHDC10Q6PID8 442 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 TRMT1LQ7Z2T5 733 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 NUDCD3Q8IVD9 361 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 ICA1LQ8NDH6 482 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 ZNF516Q92618 1163 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 MCEEQ96PE7 176 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 RGPD3A6NKT7 1758 aaPredicted RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 RGPD4Q7Z3J3 1758 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 PDE5AO76074 875 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 CLPTM1O96005 669 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 TFAP2AP05549 437 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 WEE2P0C1S8 567 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 BASP1P80723 227 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 OGDHQ02218 1023 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 WASHC5Q12768 1159 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 TMEM270Q6UE05 265 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 SLC26A11Q86WA9 606 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 C20orf27Q9GZN8 174 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 AGTPBP1Q9UPW5 1226 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 PCDHB4Q9Y5E5 795 aa16.04■□□□□ 0.16
SCAMP2-201ENST00000268099 CYB561D2O14569 222 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 CASQ2O14958 399 aaPredicted RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 PEX1O43933 1283 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 SORBS2O94875 1100 aaKnown RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 RAG1P15918 1043 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 YWHABP31946 246 aaKnown RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 SERPINB6P35237 376 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 QARSP47897 775 aaKnown RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 IRX4P78413 519 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 PLA2G4FQ68DD2 849 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 LMBRD2Q68DH5 695 aaPredicted RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 C1orf228Q6PIY5 440 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 PTF1AQ7RTS3 328 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 GPD1LQ8N335 351 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 CCDC124Q96CT7 223 aaKnown RBP16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 GCNAQ96QF7 691 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 MAD1L1Q9Y6D9 718 aa16.03■□□□□ 0.16
SCAMP2-201ENST00000268099 CCDC160A6NGH7 325 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms