RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 KRT82Q9NSB4 513 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 TMEM161AQ9NX61 479 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
SCAF11-201ENST00000266589 R3HDM2Q9Y2K5 976 aaKnown RBP12.14□□□□□ -0.47
SCAF11-201ENST00000266589 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 F8W810 466 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 M0QZQ0 153 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 DPYSL4O14531 572 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 CAPN15O75808 1086 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 DDHD2O94830 711 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 FAM200BP0CF97 657 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 PAX3P23760 479 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 ECHS1P30084 290 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 SDC4P31431 198 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 PCK1P35558 622 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 ATP11AP98196 1134 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 ADIGQ0VDE8 80 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 DCLRE1AQ6PJP8 1040 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 FAM35AQ86V20 835 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
SCAF11-201ENST00000266589 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 SEPT8Q92599 483 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 PCED1BQ96HM7 432 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 RTP3Q9BQQ7 232 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 ERP44Q9BS26 406 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 DCLK3Q9C098 648 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 TBC1D13Q9NVG8 400 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 DSEQ9UL01 958 aa12.13□□□□□ -0.47
SCAF11-201ENST00000266589 hCG_1818297A0A087WSY0 165 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 TRUB2O95900 331 aaKnown RBP12.12□□□□□ -0.47
SCAF11-201ENST00000266589 CYP11A1P05108 521 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 PTPN7P35236 360 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 SCNN1AP37088 669 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 CDKN2BP42772 138 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 RNASELQ05823 741 aaKnown RBP12.12□□□□□ -0.47
SCAF11-201ENST00000266589 ADCY2Q08462 1091 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 DSC1Q08554 894 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 RAB6CQ53S08 254 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 TFDP3Q5H9I0 405 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 KRT222Q8N1A0 295 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.12□□□□□ -0.473e-6■■■■■ 50.8
SCAF11-201ENST00000266589 SUSD3Q96L08 255 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 PEBP4Q96S96 227 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 RAB6CQ9H0N0 254 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM114A2Q9NRY5 505 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM153AQ9UHL3 310 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 C3orf70A6NLC5 250 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-201ENST00000266589 ENPP3O14638 875 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 AP1G2O75843 785 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 TJP3O95049 919 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 ECEL1O95672 775 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 COL6A1P12109 1028 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 DESP17661 470 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 NNTQ13423 1086 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 DUPD1Q68J44 220 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 OVOS1Q6IE37 1185 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 COLGALT2Q8IYK4 626 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM172AQ8WUF8 416 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 KCTD13Q8WZ19 329 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 HSPH1Q92598 858 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 APBB2Q92870 758 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 SCLYQ96I15 445 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-201ENST00000266589 FAM118BQ9BPY3 351 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 ACBD6Q9BR61 282 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 NEUROG2Q9H2A3 272 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 HIPK3Q9H422 1215 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 ELAC1Q9H777 363 aaKnown RBP12.12□□□□□ -0.47
SCAF11-201ENST00000266589 NGRNQ9NPE2 291 aaKnown RBP12.12□□□□□ -0.47
SCAF11-201ENST00000266589 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 PCDHB7Q9Y5E2 793 aa12.12□□□□□ -0.47
SCAF11-201ENST00000266589 PRPSAP2O60256 369 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 KDELR1P24390 212 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 OR1G1P47890 313 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 CCNG2Q16589 344 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 TCTN1Q2MV58 587 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 INTS6LQ5JSJ4 861 aaKnown RBP12.11□□□□□ -0.47
SCAF11-201ENST00000266589 ANKRD33Q7Z3H0 272 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 ABI1Q8IZP0 508 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 SIX6OS1Q8N1H7 587 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 KCTD6Q8NC69 237 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 SLCO2A1Q92959 643 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 MYLPFQ96A32 169 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 ACBD3Q9H3P7 528 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 VIPAS39Q9H9C1 493 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 LRRC4Q9HBW1 653 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 TET1Q8NFU7 2136 aa12.11□□□□□ -0.47
SCAF11-201ENST00000266589 CD48P09326 243 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms