RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 HHATQ5VTY9 493 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 ANKRD22Q5VYY1 191 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 OR6B2Q6IFH4 312 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 C3orf62Q6ZUJ4 267 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 ACAP3Q96P50 834 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 FAM124BQ9H5Z6 455 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 KIF9Q9HAQ2 790 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.78□□□□□ -0.68
LSG1-201ENST00000265245 PTPRFP10586 1907 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 BANF1O75531 89 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 VTNP04004 478 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 STIP1P31948 543 aaKnown RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 FOXN2P32314 431 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 NDST1P52848 882 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 ROR1Q01973 937 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 SEPT7Q16181 437 aaKnown RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 TBC1D1Q86TI0 1168 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 PNMA8AQ86V59 439 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 MAP7D3Q8IWC1 876 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 UNC45BQ8IWX7 931 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 SHCBP1Q8NEM2 672 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 CXorf38Q8TB03 319 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 LRRC8CQ8TDW0 803 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 NT5C1AQ9BXI3 368 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 XPO7Q9UIA9 1087 aaKnown RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 CLUHO75153 1309 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 DESP17661 470 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 SSTR1P30872 391 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 GPX6P59796 221 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 ELF3P78545 371 aaPredicted RBP10.77□□□□□ -0.68
LSG1-201ENST00000265245 RNASELQ05823 741 aaKnown RBP10.77□□□□□ -0.68
LSG1-201ENST00000265245 INCA1Q0VD86 236 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 DNAJC3Q13217 504 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 STILQ15468 1287 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 TAF5Q15542 800 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 FAM47CQ5HY64 1035 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 GJC2Q5T442 439 aaPredicted RBP10.77□□□□□ -0.68
LSG1-201ENST00000265245 DARS2Q6PI48 645 aaKnown RBP10.77□□□□□ -0.68
LSG1-201ENST00000265245 CEP57Q86XR8 500 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 TMEM130Q8N3G9 435 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 FBXO36Q8NEA4 188 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 DENND1AQ8TEH3 1009 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 CDCA5Q96FF9 252 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 ZCWPW1Q9H0M4 648 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 ECT2Q9H8V3 914 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 DPP3Q9NY33 737 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 PRKAG3Q9UGI9 489 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 TSPAN16Q9UKR8 245 aa10.77□□□□□ -0.68
LSG1-201ENST00000265245 SCN4AP35499 1836 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 MGRN1O60291 552 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 RPSAP08865 295 aaKnown RBP10.77□□□□□ -0.69
LSG1-201ENST00000265245 KRT4P19013 534 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 USP4Q13107 963 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 GALNTL6Q49A17 601 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 FNBP1LQ5T0N5 605 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 RNF43Q68DV7 783 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 LCLAT1Q6UWP7 414 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 NT5DC4Q86YG4 428 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 RXFP2Q8WXD0 754 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 ACSS3Q9H6R3 686 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 CD248Q9HCU0 757 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 C2CD4BA6NLJ0 364 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 E5RJQ4 531 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 E7ESA3 106 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 RPA3P35244 121 aaPredicted RBP10.77□□□□□ -0.69
LSG1-201ENST00000265245 MSH2P43246 934 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 CCNA1P78396 465 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 GAD2Q05329 585 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 BNIP1Q12981 228 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 ACVR2BQ13705 512 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 KRT81Q14533 505 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 SETDB1Q15047 1291 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 PDK4Q16654 411 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 CDO1Q16878 200 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 PPTC7Q8NI37 304 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 FBF1Q8TES7 1133 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 AFG1LQ8WV93 481 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 KLHL29Q96CT2 875 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 KIF12Q96FN5 646 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 PAFAH2Q99487 392 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 STARD13Q9Y3M8 1113 aa10.77□□□□□ -0.69
LSG1-201ENST00000265245 TMEM63AO94886 807 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 STAU1O95793 577 aaKnown RBP10.76□□□□□ -0.69
LSG1-201ENST00000265245 ZNF286BP0CG31 522 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 TSHRP16473 764 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 NCALDP61601 193 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 MOGSQ13724 837 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 DPYSL3Q14195 570 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 MSS51Q4VC12 460 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 MAP1SQ66K74 1059 aaPredicted RBP10.76□□□□□ -0.69
LSG1-201ENST00000265245 RGS9BPQ6ZS82 235 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 ZC3H18Q86VM9 953 aaKnown RBP10.76□□□□□ -0.69
LSG1-201ENST00000265245 FITM2Q8N6M3 262 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 LINC01465Q8N7H1 131 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 RMDN2Q96LZ7 410 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
LSG1-201ENST00000265245 SSU72Q9NP77 194 aaKnown RBP10.76□□□□□ -0.69
LSG1-201ENST00000265245 VTA1Q9NP79 307 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms