RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CASP4P49662 377 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 TRIM28Q13263 835 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 AGAP9Q5VTM2 703 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 CACHD1Q5VU97 1274 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 BNC2Q6ZN30 1099 aaPredicted RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 STKLD1Q8NE28 680 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 FLCNQ8NFG4 579 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 SYN2Q92777 582 aaPredicted RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 CHST12Q9NRB3 414 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 DCDC2Q9UHG0 476 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 SOX13Q9UN79 622 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 IGSF9BQ9UPX0 1349 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 E9PBE3 544 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 KLHL41O60662 606 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 SOX6P35712 828 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 RAB14P61106 215 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 CUL2Q13617 745 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 ALFQ53S48 1182 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 TARS2Q9BW92 718 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 KLK14Q9P0G3 267 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 GTF2A1LQ9UNN4 478 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 PSTPIP1O43586 416 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 C6orf222P0C671 652 aaPredicted RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 RPS7P62081 194 aaKnown RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 TADA1Q96BN2 335 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 IQSEC2Q5JU85 1478 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 FDFT1P37268 417 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 SERPINB8P50452 374 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 THRAP10827 490 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 CD44P16070 742 aaKnown RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 BGNP21810 368 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 POU1F1P28069 291 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 HARS2P49590 506 aaKnown RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 ITPK1Q13572 414 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 NFYCQ13952 458 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 TRIM65Q6PJ69 517 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 LINC00523Q86TU6 105 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 UNC45BQ8IWX7 931 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 ZNF333Q96JL9 665 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 UNKQ9C0B0 810 aaKnown RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 NMRK2Q9NPI5 230 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 SLC37A4O43826 429 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 ALOX15P16050 662 aaPredicted RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 KHDRBS2Q5VWX1 349 aaKnown RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 C16orf86Q6ZW13 317 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 USP13Q92995 863 aaPredicted RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 RAD18Q9NS91 495 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 MRGBPQ9NV56 204 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 AP4S1Q9Y587 144 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 EZH2Q15910 746 aaKnown RBP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 KBTBD12Q3ZCT8 623 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 OR8H2Q8N162 312 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL5A3-201ENST00000264828 HACL1Q9UJ83 578 aa18.61■□□□□ 0.57
COL5A3-201ENST00000264828 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 HIST2H2ACQ16777 129 aaPredicted RBP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 GLRA4Q5JXX5 417 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 HIST2H2AA3Q6FI13 130 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 SH3GL1Q99961 368 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 WDCPQ9H6R7 721 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 TBX20Q9UMR3 447 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 CPSF4O95639 269 aaKnown RBP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 FAM200BP0CF97 657 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 RAP1GAPP47736 663 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 SARSP49591 514 aaKnown RBP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 IZUMO2Q6UXV1 221 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 DDI1Q8WTU0 396 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 HNRNPLLQ8WVV9 542 aaKnown RBP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 KLHL4Q9C0H6 718 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 CAPN6Q9Y6Q1 641 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 A0A087X0T9 212 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 FAM228BP0C875 321 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 AGPAT3Q9NRZ7 376 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 KRT84Q9NSB2 600 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 ABI2Q9NYB9 513 aaPredicted RBP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 CFAP99D6REC4 459 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 RASA1P20936 1047 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 PLEKHA7Q6IQ23 1121 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 C4orf22Q6V702 233 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 ERGIC2Q96RQ1 377 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 NFKBIL1Q9UBC1 381 aaPredicted RBP18.6■□□□□ 0.57
COL5A3-201ENST00000264828 ZNF682O95780 498 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 CSF1RP07333 972 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 HSMCR30P0CW71 290 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 SBK1Q52WX2 424 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 PRAMEF18Q5VWM3 479 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 FUT8Q9BYC5 575 aa18.6■□□□□ 0.57
COL5A3-201ENST00000264828 FOXN3O00409 490 aaPredicted RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 APOA4P06727 396 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 PDPK2PQ6A1A2 396 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 ANXA9O76027 345 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 PBLDP30039 288 aaPredicted RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 MMRN1Q13201 1228 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 SPIRE2Q8WWL2 714 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms