RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 KATNAL2Q8IYT4 538 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 RXFP2Q8WXD0 754 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 KCNK16Q96T55 309 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 CNPY3Q9BT09 278 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 LRRC4Q9HBW1 653 aa24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 RBM12Q9NTZ6 932 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-201ENST00000263121 LRCH4O75427 683 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 GRAP2O75791 330 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 FGGP02679 453 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 BDNFP23560 247 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 ALDH7A1P49419 539 aaKnown RBP24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 CLUL1Q15846 466 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 SEL1L2Q5TEA6 688 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 C4orf50Q6ZRC1 276 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 C16orf59Q7L2K0 433 aa24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 TMCO2Q7Z6W1 182 aaPredicted RBP24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 DCP1BQ8IZD4 617 aaKnown RBP24.03■■□□□ 1.44
SMARCB1-201ENST00000263121 PTPRSQ13332 1948 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 OR4Q2P0C623 313 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 PDGFRAP16234 1089 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 SSR1P43307 286 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 ZNF280DQ6N043 979 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 CEP57Q86XR8 500 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 CMTR2Q8IYT2 770 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 B3GALT6Q96L58 329 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 DMAP1Q9NPF5 467 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 ASNSD1Q9NWL6 643 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 PATJQ8NI35 1801 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 OR6C75A6NL08 312 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 TKTL1P51854 596 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 SLC25A11Q02978 314 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 PPIGQ13427 754 aaKnown RBP eCLIP24.02■■□□□ 1.442e-8■■□□□ 13.4
SMARCB1-201ENST00000263121 CTXN3Q4LDR2 81 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 SLC39A12Q504Y0 691 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 EFHC1Q5JVL4 640 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 GPRIN1Q7Z2K8 1008 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 SPATA2LQ8IUW3 424 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 GPR161Q8N6U8 529 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 NAP1L3Q99457 506 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 PLVAPQ9BX97 442 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 PNPLA8Q9NP80 782 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 PRKAG2Q9UGJ0 569 aa24.02■■□□□ 1.44
SMARCB1-201ENST00000263121 TBC1D4O60343 1298 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 FBXO21O94952 628 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 NDUFV1P49821 464 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 RABGGTBP53611 331 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 MRPS5P82675 430 aaKnown RBP24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 LONRF2Q1L5Z9 754 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 CCDC14Q49A88 953 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 RTP2Q5QGT7 225 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 FAM117BQ6P1L5 589 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 OTOP2Q7RTS6 562 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 POLNQ7Z5Q5 900 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 RNF168Q8IYW5 571 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 SIX6OS1Q8N1H7 587 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 EXD1Q8NHP7 514 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 IGSF21Q96ID5 467 aa24.01■■□□□ 1.43
SMARCB1-201ENST00000263121 PCK1P35558 622 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 NFE2Q16621 373 aaPredicted RBP24■■□□□ 1.43
SMARCB1-201ENST00000263121 TAS1R1Q7RTX1 841 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 BADQ92934 168 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 TTPALQ9BTX7 342 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 EPC1Q9H2F5 836 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 ANKZF1Q9H8Y5 726 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 CNGB3Q9NQW8 809 aa24■■□□□ 1.43
SMARCB1-201ENST00000263121 KRIT1O00522 736 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 HSF2BPO75031 334 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 RNF8O76064 485 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 SDC4P31431 198 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 GJC1P36383 396 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 PTPN9P43378 593 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 FPGSQ05932 587 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 C15orf59Q2T9L4 293 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 TXNRD3NBQ6F5E7 133 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 KCNT2Q6UVM3 1135 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 SLC13A5Q86YT5 568 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 FUBP3Q96I24 572 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 CFAP57Q96MR6 1250 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 C11orf84Q9BUA3 381 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 VN1R3Q9BXE9 311 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 AP1M1Q9BXS5 423 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 OXCT2Q9BYC2 517 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 ULBP1Q9BZM6 244 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 CCDC188H7C350 402 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 H7C4K7 107 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 GLI1P08151 1106 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 IL1R2P27930 398 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 DAOAP59103 153 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 BTG3Q14201 252 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 HADHQ16836 314 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 ATP13A4Q4VNC1 1196 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 SH3PXD2AQ5TCZ1 1133 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 ANKS3Q6ZW76 656 aa23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 NDRG1Q92597 394 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 DDX23Q9BUQ8 820 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 DDX56Q9NY93 547 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 MRPL42Q9Y6G3 142 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-201ENST00000263121 DAB1O75553 588 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 ZRANB2O95218 330 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 FGBP02675 491 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms