RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 IPMKQ8NFU5 416 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 IL1RAPL1Q9NZN1 696 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 MCM8Q9UJA3 840 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 SNX12Q9UMY4 172 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
TTC39A-202ENST00000262676 EEF2KO00418 725 aaKnown RBP13.31□□□□□ -0.28
TTC39A-202ENST00000262676 ACOT2P49753 483 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 ARF5P84085 180 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 ARHGEF7Q14155 803 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 SLC39A10Q9ULF5 831 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 CDH16O75309 829 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 ITIH2P19823 946 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 GLRA4Q5JXX5 417 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 SIRT2Q8IXJ6 389 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 VPS37AQ8NEZ2 397 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
TTC39A-202ENST00000262676 C1orf232A0A0U1RR37 186 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 NCF1BA6NI72 391 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 NCF1CA8MVU1 366 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 NPTXRO95502 500 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 STAG3L1P0CL83 205 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 NCF1P14598 390 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 WEE1P30291 646 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 SPRP35270 261 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CCT3P49368 545 aaKnown RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 DDX39BQ13838 428 aaKnown RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 SLC25A24Q6NUK1 477 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 SGSM3Q96HU1 749 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CYP39A1Q9NYL5 469 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CDY2AQ9Y6F7 541 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CDY1Q9Y6F8 540 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 BACE1P56817 501 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 TKFCQ3LXA3 575 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 DENND6AQ8IWF6 608 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CHST13Q8NET6 341 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 LY9Q9HBG7 655 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 MBD2Q9UBB5 411 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 PSMB9P28065 219 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 MAGEA4P43358 317 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CNTN1Q12860 1018 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 USP50Q70EL3 339 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 NT5DC4Q86YG4 428 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 PCSK9Q8NBP7 692 aaKnown RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 ERAP1Q9NZ08 941 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 ZNF543Q08ER8 600 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 TWF1Q12792 350 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 TXNRD3Q86VQ6 643 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 KRT73Q86Y46 540 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 EPHX4Q8IUS5 362 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 DPP10Q8N608 796 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 STKLD1Q8NE28 680 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 RUBCNQ92622 972 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 AGO2Q9UKV8 859 aaKnown RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 RPAP1Q9BWH6 1393 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 PEX1O43933 1283 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 FAM20BO75063 409 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 GRAP2O75791 330 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CPSF4O95639 269 aaKnown RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 SNRPAP09012 282 aaKnown RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 DNAJC3Q13217 504 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 UGP2Q16851 508 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 CYB5D1Q6P9G0 228 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 SIX5Q8N196 739 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 TERB1Q8NA31 727 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 PNKPQ96T60 521 aa13.3□□□□□ -0.28
TTC39A-202ENST00000262676 IRX2Q9BZI1 471 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-202ENST00000262676 SNTNA6NMZ2 147 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 ZNF682O95780 498 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 YWHAZP63104 245 aaKnown RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 ARHGAP15Q53QZ3 475 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 SCARA3Q6AZY7 606 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 KLHL1Q9NR64 748 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 RPS6KB2Q9UBS0 482 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 GRID1Q9ULK0 1009 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 RAD51CO43502 376 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 FKTNO75072 461 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 ALOX12P18054 663 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 ITGA8P53708 1063 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 SETD3Q86TU7 594 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 CELF4Q9BZC1 486 aaKnown RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 CTNNAL1Q9UBT7 734 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 WNT10BO00744 389 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 CNOT3O75175 753 aaKnown RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 GUCA1AP43080 201 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 RGS4P49798 205 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 MAPK10P53779 464 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms