RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PCDHB2Q9Y5E7 798 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 TYROBPO43914 113 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 VCPP55072 806 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 MRPS9P82933 396 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 HYIQ5T013 277 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 KLHDC10Q6PID8 442 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 XAB2Q9HCS7 855 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 SEL1LQ9UBV2 794 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 ADAMTS6Q9UKP5 1117 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 TCRBV9S1A1TA0A576 114 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 TM9SF1O15321 606 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 HLA-DRAP01903 254 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 MUTP22033 750 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 GCAP28676 217 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 ALDH1A3P47895 512 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 FSTL1Q12841 308 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 LSAMPQ13449 338 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 UNC45BQ8IWX7 931 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 RCOR2Q8IZ40 523 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 SHC3Q92529 594 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 NUF2Q9BZD4 464 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 NGRNQ9NPE2 291 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 BHMG1C9JSJ3 638 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 ECE2O60344 883 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 FKBP6O75344 327 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 SNRPAP09012 282 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 GTF2H1P32780 548 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 RPL22P35268 128 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 ACTR3P61158 418 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 PHEXP78562 749 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 TTLL12Q14166 644 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 HADHQ16836 314 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 ACAD11Q709F0 780 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 NLRP7Q8WX94 980 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 ATP2A3Q93084 1043 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 ALKBH8Q96BT7 664 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 TRIM11Q96F44 468 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 CCDC97Q96F63 343 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 CYLDQ9NQC7 956 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 PPP4CP60510 307 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 BORCS6Q96GS4 357 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 PARVAQ9NVD7 372 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 IP6K2Q9UHH9 426 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 AP4B1Q9Y6B7 739 aa16.55■□□□□ 0.24
PRPF40B-201ENST00000261897 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 ANKRD12Q6UB98 2062 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 ALOX15BO15296 676 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 KRT38O76015 456 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 DLDP09622 509 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 EEF1B2P24534 225 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 HDAC4P56524 1084 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 TFAMQ00059 246 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 TRPC3Q13507 836 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 CXorf38Q8TB03 319 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 RNPEPQ9H4A4 650 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 GPATCH2LQ9NWQ4 482 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 SLC17A6Q9P2U8 582 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 SCINQ9Y6U3 715 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 ZSCAN9O15535 394 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 RPL5P46777 297 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 CDH6P55285 790 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 RHBDL3P58872 404 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 AOC3Q16853 763 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 CES3Q6UWW8 571 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 C12orf50Q8NA57 414 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 EXD1Q8NHP7 514 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 POLR3CQ9BUI4 534 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 C20orf96Q9NUD7 363 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 PNPOQ9NVS9 261 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 CLUHO75153 1309 aa16.54■□□□□ 0.24
PRPF40B-201ENST00000261897 ZBED1O96006 694 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 GRIA2P42262 883 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 ECE1P42892 770 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TMED10P49755 219 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 MAMLD1Q13495 774 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 CTC1Q2NKJ3 1217 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 ANKRD20A4Q4UJ75 823 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 FASTKD1Q53R41 847 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 MAP3K21Q5TCX8 1036 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 SESTD1Q86VW0 696 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 GIPC3Q8TF64 312 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 PHF24Q9UPV7 400 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TTLL3Q9Y4R7 772 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 HPCAP84074 193 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 PRKG1Q13976 671 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 MTERF2Q49AM1 385 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 NCAPG2Q86XI2 1143 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 CLVS1Q8IUQ0 354 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 BANPQ8N9N5 519 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 CDRT15Q96T59 188 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 ZNF335Q9H4Z2 1342 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TTC36A6NLP5 189 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TCP10L2B9ZVM9 353 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 ADCY6O43306 1168 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TMEM63AO94886 807 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms