RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 DCAF4Q8WV16 495 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 PLEKHA8Q96JA3 519 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
TMEM260-201ENST00000261556 IRF2BPLQ9H1B7 796 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 SEMA6AQ9H2E6 1030 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 COQ3Q9NZJ6 369 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 PCDHB4Q9Y5E5 795 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 TLR3O15455 904 aaKnown RBP13.48□□□□□ -0.25
TMEM260-201ENST00000261556 MSX2P35548 267 aaPredicted RBP13.48□□□□□ -0.25
TMEM260-201ENST00000261556 FDFT1P37268 417 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 BFSP2Q13515 415 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 C12orf60Q5U649 245 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 ATG16L1Q676U5 607 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 ALYREFQ86V81 257 aaKnown RBP13.48□□□□□ -0.25
TMEM260-201ENST00000261556 CLEC10AQ8IUN9 316 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 TCAIMQ8N3R3 496 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 EIF1ADQ8N9N8 165 aaKnown RBP13.48□□□□□ -0.25
TMEM260-201ENST00000261556 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 C12orf65Q9H3J6 166 aaKnown RBP13.48□□□□□ -0.25
TMEM260-201ENST00000261556 TAGLN3Q9UI15 199 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
TMEM260-201ENST00000261556 FAM237BA0A1B0GVD1 139 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 TPST1O60507 370 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 CSF1RP07333 972 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 PSAPP07602 524 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 POLR2EP19388 210 aaKnown RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 AQP5P55064 265 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 PHC1P78364 1004 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 AP3B2Q13367 1082 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 GALNT18Q6P9A2 607 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 ADCK1Q86TW2 530 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 CRAMP1Q96RY5 1269 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SPON1Q9HCB6 807 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 DAGLAQ9Y4D2 1042 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 MYPNQ86TC9 1320 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 KIAA0391O15091 583 aaKnown RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 EDF1O60869 148 aaKnown RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 ZNF12P17014 697 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 AKR1D1P51857 326 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 BNIP3Q12983 259 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 MTMR1Q13613 665 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 RINT1Q6NUQ1 792 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 ZNF662Q6ZS27 426 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 GATAD2AQ86YP4 633 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 PLEKHO2Q8TD55 490 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SLC7A6OSQ96CW6 309 aaPredicted RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 FERD3LQ96RJ6 166 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 CCSER2Q9H7U1 834 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 TMEM260Q9NX78 707 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 MYRFQ9Y2G1 1151 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SGK1O00141 431 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 PJA2O43164 708 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 TSC22D2O75157 780 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SLC9A1P19634 815 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 MAN1A1P33908 653 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 COPAP53621 1224 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 MFAP3P55082 362 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 RFFLQ8WZ73 363 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 MCRS1Q96EZ8 462 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 ADNPQ9H2P0 1102 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 PSMD12O00232 456 aaPredicted RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 NME3Q13232 169 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 TIGD2Q4W5G0 525 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 PPM1LQ5SGD2 360 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SDE2Q6IQ49 451 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 CENPUQ71F23 418 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SLC35B4Q969S0 331 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 RAB20Q9NX57 234 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 ZNRF3Q9ULT6 936 aa13.47□□□□□ -0.25
TMEM260-201ENST00000261556 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
TMEM260-201ENST00000261556 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 ZMPSTE24O75844 475 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 KCNA4P22459 653 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 FECHP22830 423 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 IL4RP24394 825 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 COILP38432 576 aaPredicted RBP13.46□□□□□ -0.25
TMEM260-201ENST00000261556 ARL4CP56559 192 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 CDK16Q00536 496 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 GABPAQ06546 454 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 MGAT5Q09328 741 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
TMEM260-201ENST00000261556 RSAD2Q8WXG1 361 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 TSPAN4O14817 238 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 TPPPO94811 219 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 ETFBP38117 255 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.25
TMEM260-201ENST00000261556 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 ELMOD2Q8IZ81 293 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 EFHD1Q9BUP0 239 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 USP29Q9HBJ7 922 aa13.46□□□□□ -0.25
TMEM260-201ENST00000261556 SOX13Q9UN79 622 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms