RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZNF618Q5T7W0 954 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 FBXL16Q8N461 479 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ECSITQ9BQ95 431 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 TRIM39Q9HCM9 518 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 PHGDHO43175 533 aaKnown RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 DGAT1O75907 488 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 GSNP06396 782 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SOX6P35712 828 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ANGPT1Q15389 498 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SUPT20HL1Q3ZLR7 823 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SGO1Q5FBB7 561 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ARMCX4Q5H9R4 360 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 TBCELQ5QJ74 424 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 QTRT2Q9H974 415 aaKnown RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 KCND2Q9NZV8 630 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 RBMX2Q9Y388 322 aaKnown RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 KIF20BQ96Q89 1820 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 MT-CO1P00395 513 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CHN2P52757 468 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 OTUD3Q5T2D3 398 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CIAPIN1Q6FI81 312 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 TBC1D10AQ9BXI6 508 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 RPAP3Q9H6T3 665 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SP110Q9HB58 689 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SOX13Q9UN79 622 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 R3HDM2Q9Y2K5 976 aaKnown RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 IPPQ9Y573 584 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 PIK3C2BO00750 1634 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 A0A1B0GW55 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM24O15164 1050 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF862O60290 1169 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CSPG5O95196 566 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4L2P0CJ85 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4L3P0CJ86 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4L4P0CJ87 422 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4L5P0CJ88 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4L6P0CJ89 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4L7P0CJ90 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SULT1E1P49888 294 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 BAATQ14032 418 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 MEA1Q16626 185 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CYP2R1Q6VVX0 501 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC30A10Q6XR72 485 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 MARK2Q7KZI7 788 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SYTL1Q8IYJ3 562 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 STX19Q8N4C7 294 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF75CPQ92670 426 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 C2orf40Q9H1Z8 148 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DMAP1Q9NPF5 467 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DUX4Q9UBX2 424 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM32AQ9Y421 112 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ADGRB1O14514 1584 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ADGRB2O60241 1585 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 RRM1P23921 792 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DDR1Q08345 913 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ORC1Q13415 861 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 PCSK7Q16549 785 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 AADACL2Q6P093 401 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 THUMPD3Q9BV44 507 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 MRGBPQ9NV56 204 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CNOT7Q9UIV1 285 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRPC5OSA6NMA1 111 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 GLRA3O75311 464 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ATP6V1C1P21283 382 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 GALK1P51570 392 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ARMC4Q5T2S8 1044 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 UNKQ9C0B0 810 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 KCNH7Q9NS40 1196 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ITSN1Q15811 1721 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 NR5A2O00482 541 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 UNC5CO95185 931 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CCDC130P13994 396 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 DRD4P21917 467 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CCNA1P78396 465 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 KRR1Q13601 381 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CWF19L1Q69YN2 538 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 WDR59Q6PJI9 974 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZCCHC23Q6ZST2 131 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC5A5Q92911 643 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SEPHS2Q99611 448 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 TOPORSQ9NS56 1045 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM49BQ9NUQ9 324 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 PCDHGB4Q9UN71 923 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 C3orf70A6NLC5 250 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 PROCP04070 461 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 PDGFRBP09619 1106 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 PTPN7P35236 360 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 MRPS22P82650 360 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CALML6Q8TD86 181 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPATA33Q96N06 139 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 MXRA8Q9BRK3 442 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 AP5M1Q9H0R1 490 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 CYP4F12Q9HCS2 524 aa10.08□□□□□ -0.8
CTDSPL2-201ENST00000260327 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms