RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MAGEB3O15480 346 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 LIASO43766 372 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 TOP3BO95985 862 aaKnown RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 CYP1A2P05177 515 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 TBC1D25Q3MII6 688 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 FNBP1LQ5T0N5 605 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 DNAAF3Q8N9W5 541 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 EXD1Q8NHP7 514 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 DIS3LQ8TF46 1054 aaKnown RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 NR1H4Q96RI1 486 aaPredicted RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 EPS15L1Q9UBC2 864 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 AURKCQ9UQB9 309 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 FKBP6O75344 327 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 TMED10P49755 219 aaKnown RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 CRADDP78560 199 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 CHURC1Q8WUH1 139 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 RBAKQ9NYW8 714 aaPredicted RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 XPOTO43592 962 aaKnown RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 MCF2P10911 925 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 SREBF1P36956 1147 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 HDAC4P56524 1084 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 BCAR1P56945 870 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 PDK1Q15118 436 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 GSTA3Q16772 222 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 ARHGEF16Q5VV41 709 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 PANX3Q96QZ0 392 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 TIPINQ9BVW5 301 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 DHX35Q9H5Z1 703 aaKnown RBP12.82□□□□□ -0.36
USP30-201ENST00000257548 KCNH7Q9NS40 1196 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 GPATCH2LQ9NWQ4 482 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 GPC4O75487 556 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 MT-CO1P00395 513 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 CFHP08603 1231 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 FDX1P10109 184 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 RGS2P41220 211 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 SERPINB8P50452 374 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
USP30-201ENST00000257548 PRKG1Q13976 671 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 LPCAT2Q7L5N7 544 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 TREML1Q86YW5 311 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 SHC3Q92529 594 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 APOPT1Q96IL0 206 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 FOXP3Q9BZS1 431 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 KLC2Q9H0B6 622 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 RMI1Q9H9A7 625 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 LGALS13Q9UHV8 139 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 UBE4BO95155 1302 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.81□□□□□ -0.36
USP30-201ENST00000257548 APOEP02649 317 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 ITGA9Q13797 1035 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 FAM102AQ5T9C2 384 aaPredicted RBP12.81□□□□□ -0.36
USP30-201ENST00000257548 CDC42EP5Q6NZY7 148 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 GPD1LQ8N335 351 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 ENDOVQ8N8Q3 282 aaKnown RBP12.81□□□□□ -0.36
USP30-201ENST00000257548 TMEM143Q96AN5 459 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
USP30-201ENST00000257548 SNX13Q9Y5W8 968 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 NUP98P52948 1817 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 MROH7Q68CQ1 1323 aa12.81□□□□□ -0.36
USP30-201ENST00000257548 TCRBV9S1A1TA0A576 114 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 SORBS2O94875 1100 aaKnown RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 OSBPP22059 807 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CASP2P42575 452 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 FSTL1Q12841 308 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 ANKRD20A4Q4UJ75 823 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 SFT2D3Q587I9 215 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 TTC39BQ5VTQ0 682 aaPredicted RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 TXNRD3NBQ6F5E7 133 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 PAOXQ6QHF9 649 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CES3Q6UWW8 571 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 NPNTQ6UXI9 565 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 ZNF786Q8N393 782 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CMTM5Q96DZ9 223 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 WDR18Q9BV38 432 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CEP41Q9BYV8 373 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 PCDHAC2Q9Y5I4 1007 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 PRPF4O43172 522 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP30-201ENST00000257548 RARBP10826 455 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
USP30-201ENST00000257548 PSMD7P51665 324 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 SWSAP1Q6NVH7 229 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 C7orf31Q8N865 590 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 NETO2Q8NC67 525 aa12.8□□□□□ -0.36
USP30-201ENST00000257548 ZFAND2BQ8WV99 257 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms