RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
RAB3IP-201ENST00000247833 PPARGC1AQ9UBK2 798 aaKnown RBP13.17□□□□□ -0.3
RAB3IP-201ENST00000247833 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
RAB3IP-201ENST00000247833 CYTH4Q9UIA0 394 aa13.17□□□□□ -0.3
RAB3IP-201ENST00000247833 GRID1Q9ULK0 1009 aa13.17□□□□□ -0.3
RAB3IP-201ENST00000247833 STARD13Q9Y3M8 1113 aa13.17□□□□□ -0.3
RAB3IP-201ENST00000247833 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ZWINTO95229 277 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ARIH2O95376 493 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 VGLL4Q14135 290 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 BBS12Q6ZW61 710 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 OR6B3Q8NGW1 331 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 RFWD2Q8NHY2 731 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 NKD2Q969F2 451 aaPredicted RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 FBXO6Q9NRD1 293 aaPredicted RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ARMCX1Q9P291 453 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 CLUHO75153 1309 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ENTPD5O75356 428 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 HOXC6P09630 235 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 GPD1P21695 349 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 SDC4P31431 198 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 CLDN10P78369 228 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 MROH9Q5TGP6 573 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 KIAA0319LQ8IZA0 1049 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ARMC2Q8NEN0 867 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 MINDY3Q9H8M7 445 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 RSAD1Q9HA92 442 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 RABGEF1Q9UJ41 708 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 CPSF3Q9UKF6 684 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ASPAP45381 313 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 NDST1P52848 882 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ZC3H12AQ5D1E8 599 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 ACOT1Q86TX2 421 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 SLC35B2Q8TB61 432 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 PCMTD2Q9NV79 361 aa13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 GEMIN8Q9NWZ8 242 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-201ENST00000247833 A6NJR5 290 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 ACKR2O00590 384 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 ATP5HO75947 161 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 GCAP28676 217 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 SERPINB3P29508 390 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 PHKA2P46019 1235 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 ZNF280AP59817 542 aaPredicted RBP13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 AGGF1Q8N302 714 aaeCLIP13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 C1orf127Q8N9H9 656 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 WDR35Q9P2L0 1181 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 TSPAN16Q9UKR8 245 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 COL4A5P29400 1685 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 PIGRP01833 764 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 ADORA2BP29275 332 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 TMEM132DQ14C87 1099 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 LGSNQ5TDP6 509 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 MECRQ9BV79 373 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 ELOVL4Q9GZR5 314 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 KLC2Q9H0B6 622 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
RAB3IP-201ENST00000247833 TCRBV9S1A1TA0A576 114 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 GPR25O00155 361 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 KRT37O76014 449 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 APOC2P02655 101 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 HMGCRP04035 888 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 RBL1P28749 1068 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 GOLGA7BQ2TAP0 167 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 XYLT1Q86Y38 959 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 TTC8Q8TAM2 541 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 ACSS3Q9H6R3 686 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 ARHGEF3Q9NR81 526 aa13.15□□□□□ -0.31
RAB3IP-201ENST00000247833 UPP2O95045 317 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 MYL2P10916 166 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 LCP1P13796 627 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 ZNF132P52740 706 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 KDSRQ06136 332 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 ANKRD20A2Q5SQ80 823 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 ANKRD20A1Q5TYW2 823 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 ARID3BQ8IVW6 561 aaPredicted RBP13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 CCNYQ8ND76 341 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 FAM172AQ8WUF8 416 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 TRIM56Q9BRZ2 755 aaKnown RBP13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 CEP41Q9BYV8 373 aa13.14□□□□□ -0.31
RAB3IP-201ENST00000247833 ZNF408Q9H9D4 720 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms