RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 SNX12Q9UMY4 172 aa18.43■□□□□ 0.54
HOXC6-201ENST00000243108 ZFP37Q9Y6Q3 630 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-201ENST00000243108 PI15O43692 258 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 LRG1P02750 347 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 CPB1P15086 417 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 CDR1P51861 262 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 MFAP3P55082 362 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 ZACNQ401N2 412 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 HS6ST3Q8IZP7 471 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 SIX5Q8N196 739 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 CXorf38Q8TB03 319 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 KAT5Q92993 513 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 NT5C1BQ96P26 610 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 CORO1BQ9BR76 489 aa18.42■□□□□ 0.54
HOXC6-201ENST00000243108 RBAKQ9NYW8 714 aaPredicted RBP18.42■□□□□ 0.54
HOXC6-201ENST00000243108 A0A0A6YYK5 440 aaPredicted RBP18.41■□□□□ 0.54
HOXC6-201ENST00000243108 BUB1O43683 1085 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 IL18RAPO95256 599 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 C4BPAP04003 597 aaKnown RBP18.41■□□□□ 0.54
HOXC6-201ENST00000243108 H2AFZP0C0S5 128 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 SRFP11831 508 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 H2AFXP16104 143 aaPredicted RBP18.41■□□□□ 0.54
HOXC6-201ENST00000243108 CEBPBP17676 345 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 PTPN2P17706 415 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 TWF1Q12792 350 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 H2AFVQ71UI9 128 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 PPM1KQ8N3J5 372 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 PDCL2Q8N4E4 241 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 TTC9BQ8N6N2 239 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 GPR161Q8N6U8 529 aaKnown RBP18.41■□□□□ 0.54
HOXC6-201ENST00000243108 GPR152Q8TDT2 470 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 FNBP1Q96RU3 617 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 PHOX2BQ99453 314 aa18.41■□□□□ 0.54
HOXC6-201ENST00000243108 AVENQ9NQS1 362 aaPredicted RBP18.41■□□□□ 0.54
HOXC6-201ENST00000243108 MRPS23Q9Y3D9 190 aaKnown RBP18.41■□□□□ 0.54
HOXC6-201ENST00000243108 MOSPD3O75425 235 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CYP11A1P05108 521 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
HOXC6-201ENST00000243108 DUSP4Q13115 394 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 GPR17Q13304 367 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 ASTLQ6HA08 431 aaPredicted RBP18.4■□□□□ 0.54
HOXC6-201ENST00000243108 ENOSF1Q7L5Y1 443 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 C1orf127Q8N9H9 656 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 ATAD1Q8NBU5 361 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 MCRS1Q96EZ8 462 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 FAM81BQ96LP2 452 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CGRRF1Q99675 332 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 AGPAT1Q99943 283 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 PDE11AQ9HCR9 933 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 PTPRJQ12913 1337 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CTAGE15A4D2H0 777 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 OR6C75A6NL08 312 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CTAGE8P0CG41 777 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 ODC1P11926 461 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 TFAMQ00059 246 aaKnown RBP18.4■□□□□ 0.54
HOXC6-201ENST00000243108 GCNT1Q02742 428 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 TEX35Q5T0J7 233 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CTAGE6Q86UF2 777 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CTAGE4Q8IX94 777 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 FLCNQ8NFG4 579 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 KXD1Q9BQD3 176 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 MFSD1Q9H3U5 465 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 WNT16Q9UBV4 365 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 CA14Q9ULX7 337 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 SLC27A5Q9Y2P5 690 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 YIPF1Q9Y548 306 aa18.4■□□□□ 0.54
HOXC6-201ENST00000243108 MTMR11A4FU01 709 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 CYB561D2O14569 222 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 SRGAP2O75044 1071 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 TCP1P17987 556 aaKnown RBP18.39■□□□□ 0.53
HOXC6-201ENST00000243108 TNFAIP3P21580 790 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 TAF6P49848 677 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 GPC5P78333 572 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 CKAP4Q07065 602 aaKnown RBP18.39■□□□□ 0.53
HOXC6-201ENST00000243108 IFI16Q16666 785 aaKnown RBP18.39■□□□□ 0.53
HOXC6-201ENST00000243108 TDRD10Q5VZ19 366 aaKnown RBP18.39■□□□□ 0.53
HOXC6-201ENST00000243108 WSCD1Q658N2 575 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 FBXO38Q6PIJ6 1188 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 NT5DC4Q86YG4 428 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 TLR10Q9BXR5 811 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 LRRC3Q9BY71 257 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 OXCT2Q9BYC2 517 aaPredicted RBP18.39■□□□□ 0.53
HOXC6-201ENST00000243108 PLA2G2FQ9BZM2 168 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 SLC2A4RGQ9NR83 387 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 MAFFQ9ULX9 164 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 HYOU1Q9Y4L1 999 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 NCANO14594 1321 aa18.39■□□□□ 0.53
HOXC6-201ENST00000243108 WDR87Q6ZQQ6 2873 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 GRID2IPA4D2P6 1211 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 TULP1O00294 542 aaPredicted RBP18.38■□□□□ 0.53
HOXC6-201ENST00000243108 PALMO75781 387 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 SOAT2O75908 522 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 ITGB3P05106 788 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 TMEM253P0C7T8 217 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 GJA1P17302 382 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 TNNI1P19237 187 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
HOXC6-201ENST00000243108 CLCN5P51795 746 aa18.38■□□□□ 0.53
HOXC6-201ENST00000243108 GALCP54803 685 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms