RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 DRICH1Q6PGQ1 229 aaPredicted RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 BBS12Q6ZW61 710 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 ASRGL1Q7L266 308 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 PDIK1LQ8N165 341 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 ATP11CQ8NB49 1132 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 MECRQ9BV79 373 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 ZNF395Q9H8N7 513 aaPredicted RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 FBXO6Q9NRD1 293 aaPredicted RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 PCDHGC3Q9UN70 934 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 SOCS7O14512 581 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 KCNN4O15554 427 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 SKAP2O75563 359 aaPredicted RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 DDNO94850 711 aaPredicted RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 TOP3BO95985 862 aaKnown RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 PYGBP11216 843 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 ELF1P32519 619 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 CLNS1AP54105 237 aaKnown RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 IRX4P78413 519 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 MBTD1Q05BQ5 628 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 MOGSQ13724 837 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 CA9Q16790 459 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 RNF43Q68DV7 783 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 RFX8Q6ZV50 586 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 FAF2Q96CS3 445 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 GPRC5DQ9NZD1 345 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 MGAMO43451 1857 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 TRUB2O95900 331 aaKnown RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 GLRA4Q5JXX5 417 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 CELF3Q5SZQ8 465 aaKnown RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 CDCA2Q69YH5 1023 aaPredicted RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 TSHZ1Q6ZSZ6 1077 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 FAM183BPQ6ZVS7 135 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 RIOX2Q8IUF8 465 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 PPM1NQ8N819 430 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 GBP7Q8N8V2 638 aaPredicted RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.6■□□□□ 0.41
SSPN-201ENST00000242729 TMEM176AQ96HP8 235 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 HPDLQ96IR7 371 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 SLC13A1Q9BZW2 595 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 PTPRHQ9HD43 1115 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 STRIP2Q9ULQ0 834 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 HES2Q9Y543 173 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 ACTL7BQ9Y614 415 aa17.6■□□□□ 0.41
SSPN-201ENST00000242729 TCRBV9S1A1TA0A576 114 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 CFAP69A5D8W1 941 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 PPEF2O14830 753 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 HMGCRP04035 888 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 BGNP21810 368 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 ENPEPQ07075 957 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 PTK7Q13308 1070 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 KRT81Q14533 505 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 MDH1BQ5I0G3 518 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 NLRP9Q7RTR0 991 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 LONP2Q86WA8 852 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 DCAKDQ8WVC6 231 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 FGD4Q96M96 766 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 ZMYND8Q9ULU4 1186 aaPredicted RBP17.59■□□□□ 0.41
SSPN-201ENST00000242729 CSADQ9Y600 493 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 PRPF4O43172 522 aaKnown RBP eCLIP17.59■□□□□ 0.41
SSPN-201ENST00000242729 MT-ND3P03897 115 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 APRTP07741 180 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 T-ENOLP0DO92 83 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 INSRRP14616 1297 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 ROR1Q01973 937 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 NR1H3Q13133 447 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 EFHC2Q5JST6 749 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 RIBC1Q8N443 379 aaPredicted RBP17.59■□□□□ 0.41
SSPN-201ENST00000242729 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 TTC8Q8TAM2 541 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 CCDC110Q8TBZ0 833 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 ZNF518BQ9C0D4 1074 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 IFT122Q9HBG6 1241 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 TSPAN16Q9UKR8 245 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 IKBKGQ9Y6K9 419 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 USH1CQ9Y6N9 552 aa17.59■□□□□ 0.41
SSPN-201ENST00000242729 LPXNO60711 386 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 ENTPD5O75356 428 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 KITP10721 976 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 GM2AP17900 193 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 RBL1P28749 1068 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 GPD2P43304 727 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 SESN3P58005 492 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 ACOT1Q86TX2 421 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 CCDC125Q86Z20 511 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 NIPA2Q8N8Q9 360 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 C10orf82Q8WW14 230 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 FAM167BQ9BTA0 163 aa17.58■□□□□ 0.41
SSPN-201ENST00000242729 MARCOQ9UEW3 520 aaPredicted RBP17.58■□□□□ 0.41
SSPN-201ENST00000242729 SMG5Q9UPR3 1016 aaKnown RBP17.58■□□□□ 0.41
SSPN-201ENST00000242729 CXorf49A8MYA2 514 aaPredicted RBP17.58■□□□□ 0.4
SSPN-201ENST00000242729 MED7O43513 233 aa17.58■□□□□ 0.4
SSPN-201ENST00000242729 EDNRBP24530 442 aa17.58■□□□□ 0.4
SSPN-201ENST00000242729 CDH5P33151 784 aaPredicted RBP17.58■□□□□ 0.4
SSPN-201ENST00000242729 PHBP35232 272 aa17.58■□□□□ 0.4
SSPN-201ENST00000242729 AP3M2P53677 418 aa17.58■□□□□ 0.4
SSPN-201ENST00000242729 TRIM68Q6AZZ1 485 aa17.58■□□□□ 0.4
SSPN-201ENST00000242729 TTC7BQ86TV6 843 aa17.58■□□□□ 0.4
SSPN-201ENST00000242729 CLEC4CQ8WTT0 213 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms