RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MYCT1Q8N699 235 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 NUP43Q8NFH3 380 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 SCFD2Q8WU76 684 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 MYLIPQ8WY64 445 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 DYDC2Q96IM9 177 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 WNK4Q96J92 1243 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 FIZ1Q96SL8 496 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 TIPINQ9BVW5 301 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 STRA6Q9BX79 667 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 TEKT3Q9BXF9 490 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 EPB41L1Q9H4G0 881 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 SUCLA2Q9P2R7 463 aaPredicted RBP8.45□□□□□ -1.06
CXCR4-201ENST00000241393 PNMA2Q9UL42 364 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 FRMD4BQ9Y2L6 1034 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 NCANO14594 1321 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 GOLGA6CA6NDK9 693 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 YDJCA8MPS7 323 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 WNT9AO14904 365 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 P4HA2O15460 535 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 PPIP5K2O43314 1243 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 DGKIO75912 1065 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 HEXIM1O94992 359 aaKnown RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 HPXP02790 462 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 JMJD7P0C870 316 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 GOLGA6DP0CG33 693 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 LCP1P13796 627 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 MATR3P43243 847 aaKnown RBP eCLIP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 FMO5P49326 533 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 CASP4P49662 377 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 HSD17B4P51659 736 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 CUL1Q13616 776 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 CTTNQ14247 550 aaKnown RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 CLUL1Q15846 466 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 FGD2Q7Z6J4 655 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 TPH2Q8IWU9 490 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 GSPT2Q8IYD1 628 aaKnown RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 RASGEF1CQ8N431 466 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 SLC30A5Q8TAD4 765 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 SCLYQ96I15 445 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 UIMC1Q96RL1 719 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 RUFY1Q96T51 708 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 PSMB7Q99436 277 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 PSMD1Q99460 953 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 ZNF577Q9BSK1 485 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 TARS2Q9BW92 718 aaKnown RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 PACSIN1Q9BY11 444 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 PCDH12Q9NPG4 1184 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 AGPAT3Q9NRZ7 376 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 GOLGA6AQ9NYA3 693 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 MAP3K20Q9NYL2 800 aaKnown RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 MARCH2Q9P0N8 246 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 ZNF70Q9UC06 446 aaPredicted RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 ACSL6Q9UKU0 697 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 TTC7AQ9ULT0 858 aaPredicted RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 RPTORQ8N122 1335 aa8.44□□□□□ -1.06
CXCR4-201ENST00000241393 RBBP6Q7Z6E9 1792 aaKnown RBP8.44□□□□□ -1.06
CXCR4-201ENST00000241393 ARHGEF35A5YM69 484 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 F8VZ95 297 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 PGRMC1O00264 195 aaKnown RBP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 MAPK13O15264 365 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 PMM2O15305 246 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 PPFIA4O75335 1185 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 LYPLA2O95372 231 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 GLI1P08151 1106 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 TMEM253P0C7T8 217 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 ZBTB48P10074 688 aaPredicted RBP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 ECE1P42892 770 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 TNIP1Q15025 636 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 DLGAP5Q15398 846 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 CRY1Q16526 586 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 EMC10Q5UCC4 262 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 RTKN2Q8IZC4 609 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 IQCKQ8N0W5 287 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 SPICE1Q8N0Z3 855 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 PIGOQ8TEQ8 1089 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 MS4A14Q96JA4 679 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 MXRA8Q9BRK3 442 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 SYT11Q9BT88 431 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 CELF4Q9BZC1 486 aaKnown RBP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 ISCUQ9H1K1 167 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 ST6GALNAC4Q9H4F1 302 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 SLITRK6Q9H5Y7 841 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 CRTAC1Q9NQ79 661 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 CATSPERZQ9NTU4 200 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 EHD2Q9NZN4 543 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 DBR1Q9UK59 544 aaKnown RBP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 STXBP5LQ9Y2K9 1186 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 CNTNAP1P78357 1384 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 C22orf46C9J442 243 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 IPO5O00410 1097 aaKnown RBP8.43□□□□□ -1.06
CXCR4-201ENST00000241393 KRIT1O00522 736 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 KCNK3O14649 394 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 CLIC2O15247 247 aa8.43□□□□□ -1.06
CXCR4-201ENST00000241393 MSCO60682 206 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms