RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 GJB1P08034 283 aa17■□□□□ 0.31
LTBR-201ENST00000228918 NFICP08651 508 aa17■□□□□ 0.31
LTBR-201ENST00000228918 RASSF2P50749 326 aa17■□□□□ 0.31
LTBR-201ENST00000228918 CCNG1P51959 295 aa17■□□□□ 0.31
LTBR-201ENST00000228918 C11orf91Q3C1V1 193 aa17■□□□□ 0.31
LTBR-201ENST00000228918 HSDL1Q3SXM5 330 aa17■□□□□ 0.31
LTBR-201ENST00000228918 EXOC8Q8IYI6 725 aa17■□□□□ 0.31
LTBR-201ENST00000228918 FAM13CQ8NE31 585 aa17■□□□□ 0.31
LTBR-201ENST00000228918 SLC16A10Q8TF71 515 aa17■□□□□ 0.31
LTBR-201ENST00000228918 NLRP4Q96MN2 994 aa17■□□□□ 0.31
LTBR-201ENST00000228918 TBC1D10AQ9BXI6 508 aa17■□□□□ 0.31
LTBR-201ENST00000228918 INO80BQ9C086 356 aaPredicted RBP17■□□□□ 0.31
LTBR-201ENST00000228918 RPF1Q9H9Y2 349 aaKnown RBP17■□□□□ 0.31
LTBR-201ENST00000228918 WDR3Q9UNX4 943 aaKnown RBP eCLIP17■□□□□ 0.31
LTBR-201ENST00000228918 CILPO75339 1184 aa17■□□□□ 0.31
LTBR-201ENST00000228918 ENDOD1O94919 500 aa17■□□□□ 0.31
LTBR-201ENST00000228918 PCK1P35558 622 aa17■□□□□ 0.31
LTBR-201ENST00000228918 ELK3P41970 407 aa17■□□□□ 0.31
LTBR-201ENST00000228918 ROR1Q01973 937 aa17■□□□□ 0.31
LTBR-201ENST00000228918 KCNJ11Q14654 390 aa17■□□□□ 0.31
LTBR-201ENST00000228918 NOMO1Q15155 1222 aa17■□□□□ 0.31
LTBR-201ENST00000228918 TMEM132AQ24JP5 1023 aa17■□□□□ 0.31
LTBR-201ENST00000228918 NPNTQ6UXI9 565 aa17■□□□□ 0.31
LTBR-201ENST00000228918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17■□□□□ 0.31
LTBR-201ENST00000228918 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
LTBR-201ENST00000228918 SLC5A4Q9NY91 659 aa17■□□□□ 0.31
LTBR-201ENST00000228918 NUMBLQ9Y6R0 609 aa17■□□□□ 0.31
LTBR-201ENST00000228918 IQANK1A0A1B0GTG1 560 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 TCRBV9S1A1TA0A576 114 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 M0QYV0 167 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 PEX11AO75192 247 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 DHRS4L1P0CG22 281 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 MBTD1Q05BQ5 628 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 MMRN1Q13201 1228 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 PTK7Q13308 1070 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 CTC1Q2NKJ3 1217 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 CYP4V2Q6ZWL3 525 aaPredicted RBP16.99■□□□□ 0.31
LTBR-201ENST00000228918 CLNKQ7Z7G1 428 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 RFWD2Q8NHY2 731 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 TRAPPC12Q8WVT3 735 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 SLC44A1Q8WWI5 657 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 PTPRN2Q92932 1015 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 TMEM176AQ96HP8 235 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 ADPGKQ9BRR6 497 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 MANSC1Q9H8J5 431 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 RNPEPL1Q9HAU8 725 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 SAR1AQ9NR31 198 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 LNPEPQ9UIQ6 1025 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 TNFSF13BQ9Y275 285 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 TEX264Q9Y6I9 313 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 KBTBD13C9JR72 458 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 MT-ND3P03897 115 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 EPHB2P29323 1055 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 STIP1P31948 543 aaKnown RBP16.99■□□□□ 0.31
LTBR-201ENST00000228918 GPD2P43304 727 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 NEK3P51956 506 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 ZNF143P52747 638 aaPredicted RBP16.99■□□□□ 0.31
LTBR-201ENST00000228918 IRX1P78414 480 aaPredicted RBP16.99■□□□□ 0.31
LTBR-201ENST00000228918 ANKRD20A2Q5SQ80 823 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 FAM102AQ5T9C2 384 aaPredicted RBP16.99■□□□□ 0.31
LTBR-201ENST00000228918 ANKRD20A1Q5TYW2 823 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 ANKRD20A3Q5VUR7 823 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 PLPPR4Q7Z2D5 763 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 MTDHQ86UE4 582 aaKnown RBP16.99■□□□□ 0.31
LTBR-201ENST00000228918 LONP2Q86WA8 852 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 CHSY1Q86X52 802 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 CXorf38Q8TB03 319 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 APOPT1Q96IL0 206 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 SPATC1LQ9H0A9 340 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 MINDY3Q9H8M7 445 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
LTBR-201ENST00000228918 EVPLQ92817 2033 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 NOP56O00567 594 aaKnown RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 LPXNO60711 386 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 ITGB3P05106 788 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 ETV4P43268 484 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 OVGP1Q12889 678 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 PRKG1Q13976 671 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 KBTBD12Q3ZCT8 623 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 DARS2Q6PI48 645 aaKnown RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 SERAC1Q96JX3 654 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 TLE6Q9H808 572 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.98■□□□□ 0.31
LTBR-201ENST00000228918 NKX1-2Q9UD57 310 aaPredicted RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 DCTN4Q9UJW0 460 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 GPR25O00155 361 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 HNRNPCL1O60812 293 aaKnown RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 GM2AP17900 193 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 PTPN4P29074 926 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 CDH6P55285 790 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 ZNF200P98182 395 aaPredicted RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 SLC18A2Q05940 514 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 GRIK3Q13003 919 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 NAA25Q14CX7 972 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 CELF3Q5SZQ8 465 aaKnown RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 TRNP1Q6NT89 227 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 SH2D5Q6ZV89 423 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 ZC3H18Q86VM9 953 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms