RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 NRLP54845 237 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.13
NFKB1-201ENST00000226574 DCAF12L1Q5VU92 463 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 CCDC60Q8IWA6 550 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-201ENST00000226574 ZCCHC9Q8N567 271 aaKnown RBP14.27□□□□□ -0.13
NFKB1-201ENST00000226574 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 RNF139Q8WU17 664 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 CMTM5Q96DZ9 223 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 OXNAD1Q96HP4 312 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-201ENST00000226574 ING2Q9H160 280 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 GRHL1Q9NZI5 618 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 ZNRF3Q9ULT6 936 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 STAP1Q9ULZ2 295 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 PEX1O43933 1283 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 RBL1P28749 1068 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 GCNT1Q02742 428 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 DALRD3Q5D0E6 543 aaKnown RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 TMTC4Q5T4D3 741 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 NBPF12Q5TAG4 269 aaPredicted RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 TMEM161BQ8NDZ6 487 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 FAM13CQ8NE31 585 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 CPB2Q96IY4 423 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 CLPTM1LQ96KA5 538 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 LRRC4CQ9HCJ2 640 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 SIX2Q9NPC8 291 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 MAN1C1Q9NR34 630 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 PXMP2Q9NR77 195 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 BTNL10A8MVZ5 291 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 RASSF9O75901 435 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 SETSIPP0DME0 302 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 RPL22P35268 128 aaKnown RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 PEX5P50542 639 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 ZBTB41Q5SVQ8 909 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 KLC3Q6P597 504 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 IPMKQ8NFU5 416 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 SHOC2Q9UQ13 582 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 PPP1R12AO14974 1030 aaPredicted RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 TM4SF1P30408 202 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 RBP5P82980 135 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 SLC34A1Q06495 639 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 ZDHHC24Q6UX98 284 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 RAB44Q7Z6P3 723 aaPredicted RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 ALYREFQ86V81 257 aaKnown RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 BEST2Q8NFU1 509 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 OLFM3Q96PB7 478 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 PTPRHQ9HD43 1115 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 CYP39A1Q9NYL5 469 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 CNTRLQ7Z7A1 2325 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 NCANO14594 1321 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 CYP3A7-CYP3A51PA0A087WV96 503 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 FAM155BO75949 473 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 CYP3A7P24462 503 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 GNL1P36915 607 aaPredicted RBP14.26□□□□□ -0.13
NFKB1-201ENST00000226574 MLH1P40692 756 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 TPI1P60174 286 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 KCNK16Q96T55 309 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 MCM8Q9UJA3 840 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 GGA2Q9UJY4 613 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 C2CD2Q9Y426 696 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 DTNAQ9Y4J8 743 aa14.26□□□□□ -0.13
NFKB1-201ENST00000226574 PMPCBO75439 489 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 KLHL2O95198 593 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 MYCP01106 439 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 VTNP04004 478 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 GJB1P08034 283 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 TNFSF9P41273 254 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 SH3BGRP55822 239 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 SATB1Q01826 763 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 SPRED3Q2MJR0 410 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 N4BP2L1Q5TBK1 243 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 TRABD2AQ86V40 505 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 RFWD2Q8NHY2 731 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 BAG5Q9UL15 447 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 ANGPTL3Q9Y5C1 460 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 RGPD8O14715 1765 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 CYP1A2P05177 515 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 GLRA2P23416 452 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 PTPN11Q06124 597 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 DYNC1I2Q13409 638 aaKnown RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 DACT2Q5SW24 774 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 SLC7A14Q8TBB6 771 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 GCNAQ96QF7 691 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 PIN4Q9Y237 131 aaKnown RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 PRRC2BQ5JSZ5 2229 aaKnown RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 LIASO43766 372 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 USP1O94782 785 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 PGM3O95394 542 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 POLBP06746 335 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 BST1Q10588 318 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 MXD4Q14582 209 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-201ENST00000226574 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 DENND1BQ6P3S1 775 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms