RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PSMC3P17980 439 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 DDX6P26196 483 aaKnown RBP eCLIP13.41□□□□□ -0.26
LSM5-201ENST00000223084 PON1P27169 355 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 GDI1P31150 447 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 AVPR1AP37288 418 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 PGFP49763 221 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 GOLGA7BQ2TAP0 167 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 SGO2Q562F6 1265 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 CDKAL1Q5VV42 579 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 ARHGAP17Q68EM7 881 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 MFSD6LQ8IWD5 586 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 ARL14EPQ8N8R7 260 aaPredicted RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 RBBP8NLQ8NC74 664 aaPredicted RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 RIN3Q8TB24 985 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 USP13Q92995 863 aaPredicted RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 SLITRK1Q96PX8 696 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 TRMT61BQ9BVS5 477 aaKnown RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 DUSP16Q9BY84 665 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 SIX2Q9NPC8 291 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 IL37Q9NZH6 218 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 GMIPQ9P107 970 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 AJAP1Q9UKB5 411 aaPredicted RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 COL4A3Q01955 1670 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 F5P12259 2224 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 GTPBP10A4D1E9 387 aaKnown RBP13.4□□□□□ -0.26
LSM5-201ENST00000223084 TULP2O00295 520 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 VDRP11473 427 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 KRT5P13647 590 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 BRD2P25440 801 aaKnown RBP13.4□□□□□ -0.26
LSM5-201ENST00000223084 EEF1GP26641 437 aaKnown RBP13.4□□□□□ -0.26
LSM5-201ENST00000223084 WEE1P30291 646 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 MYL5Q02045 173 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 NCAPHQ15003 741 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 KRT31Q15323 416 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 ARHGAP44Q17R89 818 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 BMP8AQ7Z5Y6 402 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 UBA3Q8TBC4 463 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 DEPDC1BQ8WUY9 529 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 ZFYVE19Q96K21 471 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 RNF38Q9H0F5 515 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 VPS16Q9H269 839 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 TDP1Q9NUW8 608 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 TSPAN16Q9UKR8 245 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
LSM5-201ENST00000223084 SYCE3A1L190 88 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 O00370 1275 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 ZNF263O14978 683 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 CYP26A1O43174 497 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 CKMP06732 381 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 PAEPP09466 180 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 HDCP19113 662 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 ZNF132P52740 706 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 MFAP3P55082 362 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 PDE4CQ08493 712 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 DPY19L2P1Q6NXN4 242 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 YAF2Q8IY57 180 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 CELF5Q8N6W0 485 aaKnown RBP13.39□□□□□ -0.27
LSM5-201ENST00000223084 ANKRD52Q8NB46 1076 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 FLCNQ8NFG4 579 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 BPIFB1Q8TDL5 484 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 HSD3B7Q9H2F3 369 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 ACP6Q9NPH0 428 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 HEBP1Q9NRV9 189 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 COMMD8Q9NX08 183 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 OBP2AQ9NY56 170 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 APEX2Q9UBZ4 518 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 ZMYM5Q9UJ78 669 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 HCN4Q9Y3Q4 1203 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
LSM5-201ENST00000223084 CACNA1AO00555 2505 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 FAM92AA1XBS5 289 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 SOBPA7XYQ1 873 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 BECN2A8MW95 431 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 STK25O00506 426 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
LSM5-201ENST00000223084 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 USP8P40818 1118 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 PPP3CCP48454 512 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 KIF11P52732 1056 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 VCPP55072 806 aaKnown RBP13.38□□□□□ -0.27
LSM5-201ENST00000223084 ZXDBP98169 803 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 PFKPQ01813 784 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 MLF2Q15773 248 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms