RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 WDR64B1ANS9 1081 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 TBX10O75333 385 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 LSM8O95777 96 aaKnown RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 DLDP09622 509 aaKnown RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 GLRA2P23416 452 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 NPTX2P47972 431 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 NEK3P51956 506 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 SP2Q02086 613 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 KCTD2Q14681 263 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 ZACNQ401N2 412 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 DNAL1Q4LDG9 190 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 PTPRN2Q92932 1015 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 MMP19Q99542 508 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 C11orf70Q9BRQ4 267 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 TMEM120AQ9BXJ8 343 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 DMAP1Q9NPF5 467 aaPredicted RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 TAS2R1Q9NYW7 299 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 CFAP69A5D8W1 941 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 TMEM191CA6NGB0 347 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 CSDE1O75534 798 aaKnown RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 KRT36O76013 467 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 TMEM191BP0C7N4 346 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 ACO1P21399 889 aaKnown RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 ETV4P43268 484 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 RPL26P61254 145 aaKnown RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 PIGHQ14442 188 aaPredicted RBP16.64■□□□□ 0.25
SF3A2-201ENST00000221494 RAB3IL1Q8TBN0 382 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 POMGNT1Q8WZA1 660 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 NCSTNQ92542 709 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 CYTH2Q99418 400 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 KCNK13Q9HB14 408 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 KMT5AQ9NQR1 393 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 MORF4L1Q9UBU8 362 aa16.64■□□□□ 0.25
SF3A2-201ENST00000221494 DENND3A2RUS2 1198 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 CUL3Q13618 768 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 SDCCAG8Q86SQ7 713 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-201ENST00000221494 ZC3H18Q86VM9 953 aaKnown RBP16.63■□□□□ 0.25
SF3A2-201ENST00000221494 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 AZIN2Q96A70 460 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 OXNAD1Q96HP4 312 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-201ENST00000221494 C7orf26Q96N11 449 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 GBP5Q96PP8 586 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 TOPORSQ9NS56 1045 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-201ENST00000221494 DCTN4Q9UJW0 460 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 STRIP2Q9ULQ0 834 aa16.63■□□□□ 0.25
SF3A2-201ENST00000221494 SIP14410 1827 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 A0A0G2JND7 137 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 EXTL3O43909 919 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 LPXNO60711 386 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 COQ9O75208 318 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 CIB2O75838 187 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 MT-ND3P03897 115 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 MMP8P22894 467 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 CCNA1P78396 465 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 UGCGQ16739 394 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 WDR72Q3MJ13 1102 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 FAM102BQ5T8I3 360 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 WDR78Q5VTH9 848 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 SLC39A4Q6P5W5 647 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 MFSD7Q6UXD7 560 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 SAPCD2Q86UD0 394 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 RASAL3Q86YV0 1011 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 GLIS1Q8NBF1 620 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 UCMAQ8WVF2 138 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 C1orf21Q9H246 121 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 VCX3BQ9H321 246 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 VCX3AQ9NNX9 186 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 MKS1Q9NXB0 559 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 CNTN3Q9P232 1028 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 SORCS3Q9UPU3 1222 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 TELO2Q9Y4R8 837 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PCDHA10Q9Y5I2 948 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 FKBP6O75344 327 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PIM1P11309 404 aaPredicted RBP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 SERPINB3P29508 390 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 GNA15P30679 374 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PGM1P36871 562 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 CDKN2BP42772 138 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PSMC4P43686 418 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 ZNF157P51786 506 aaPredicted RBP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 XIAPP98170 497 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 CUL2Q13617 745 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 DBN1Q16643 649 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 AAGABQ6PD74 315 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 KYAT3Q6YP21 454 aaKnown RBP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 OLFM3Q96PB7 478 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 FRMD8Q9BZ67 464 aaPredicted RBP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
SF3A2-201ENST00000221494 TCEAL9Q9UHQ7 104 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 SSX2IPQ9Y2D8 614 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 PPME1Q9Y570 386 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 NUMBLQ9Y6R0 609 aa16.62■□□□□ 0.25
SF3A2-201ENST00000221494 LCTP09848 1927 aa16.61■□□□□ 0.25
SF3A2-201ENST00000221494 SGK1O00141 431 aa16.61■□□□□ 0.25
SF3A2-201ENST00000221494 FCHO1O14526 889 aa16.61■□□□□ 0.25
SF3A2-201ENST00000221494 HLA-DRAP01903 254 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms