RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SLC25A41Q8N5S1 370 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 TCRBV9S1A1TA0A576 114 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 OGTO15294 1046 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 MAGEB2O15479 319 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 DESP17661 470 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 VHLP40337 213 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 ZCCHC23Q6ZST2 131 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 RELL1Q8IUW5 271 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 WDR49Q8IV35 697 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SRPK1Q96SB4 655 aaKnown RBP11.66□□□□□ -0.54
NEFM-201ENST00000221166 CPXM1Q96SM3 734 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 MIS12Q9H081 205 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 ZNF395Q9H8N7 513 aaPredicted RBP11.66□□□□□ -0.54
NEFM-201ENST00000221166 PPCSQ9HAB8 311 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SCOCQ9UIL1 159 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SYNJ2BP-COX16A0A087WUM0 186 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 DPPA5A6NC42 116 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 TM9SF1O15321 606 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 EDN1P05305 212 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 CXCL8P10145 99 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SH3PXD2AQ5TCZ1 1133 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 CRLF3Q8IUI8 442 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 MAP7D3Q8IWC1 876 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 NDUFAF2Q8N183 169 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SLC35B2Q8TB61 432 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 SCG3Q8WXD2 468 aaKnown RBP11.66□□□□□ -0.54
NEFM-201ENST00000221166 COX16Q9P0S2 106 aa11.66□□□□□ -0.54
NEFM-201ENST00000221166 GSC2O15499 205 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 UBTFL6P0CB48 400 aaPredicted RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 TCF7P36402 384 aaPredicted RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 RTP1P59025 263 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 BLMHQ13867 455 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 TFDP2Q14188 446 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 C1orf146Q5VVC0 180 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 C4orf50Q6ZRC1 276 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 RINLQ6ZS11 566 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 BBS12Q6ZW61 710 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 WDTC1Q8N5D0 677 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 TEX9Q8N6V9 391 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 VPS11Q9H270 941 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 PIH1D1Q9NWS0 290 aaKnown RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 ATAD5Q96QE3 1844 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 SPECC1L-ADORA2AF8WAN1 911 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 WFS1O76024 890 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 ITGB3P05106 788 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 ATP4AP20648 1035 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 EIF4BP23588 611 aaKnown RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 RFC5P40937 340 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 ABL2P42684 1182 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 EPHB1P54762 984 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 CDK16Q00536 496 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 NBPF20Q3BBV1 942 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 PRPF39Q86UA1 669 aaKnown RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 AGBL3Q8NEM8 1001 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 E2F7Q96AV8 911 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 OXNAD1Q96HP4 312 aaPredicted RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 FAXDC2Q96IV6 333 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 GMLQ99445 158 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 APOL6Q9BWW8 343 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 SAR1AQ9NR31 198 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 SEPT10Q9P0V9 454 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 SIGLEC16A6NMB1 481 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 CYB561D2O14569 222 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 SNRPAP09012 282 aaKnown RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 AQP5P55064 265 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 FKBP1CQ5VVH2 108 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 DRICH1Q6PGQ1 229 aaPredicted RBP11.65□□□□□ -0.54
NEFM-201ENST00000221166 BANPQ8N9N5 519 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 RXFP2Q8WXD0 754 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 APOPT1Q96IL0 206 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 ZNF518BQ9C0D4 1074 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 NMUR2Q9GZQ4 415 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 NMRK1Q9NWW6 199 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 EURLQ9NYK6 297 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
NEFM-201ENST00000221166 SPATA31C2B4DYI2 1134 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 TXNDC9O14530 226 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 B4GALT5O43286 388 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 SMNDC1O75940 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
NEFM-201ENST00000221166 STBD1O95210 358 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 OSBPP22059 807 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 AP3M2P53677 418 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 SARNPP82979 210 aaKnown RBP11.64□□□□□ -0.55
NEFM-201ENST00000221166 LY6KQ17RY6 165 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 MICALL2Q8IY33 904 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 NAT8LQ8N9F0 302 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
NEFM-201ENST00000221166 TMEM174Q8WUU8 243 aa11.64□□□□□ -0.55
NEFM-201ENST00000221166 CCDC124Q96CT7 223 aaKnown RBP11.64□□□□□ -0.55
NEFM-201ENST00000221166 CLPTM1LQ96KA5 538 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms