RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 BAG1Q99933 345 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-201ENST00000218388 SYT11Q9BT88 431 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-201ENST00000218388 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 ARHGAP20Q9P2F6 1191 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 HHLA1C9JL84 531 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 RFPL2O75678 378 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 FBXO21O94952 628 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 PLEKP08567 350 aaPredicted RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 CFHP08603 1231 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 GZMAP12544 262 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 RGS7P49802 495 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 CENPCQ03188 943 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 ITIH3Q06033 890 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 RARS2Q5T160 578 aaKnown RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 SDHAF4Q5VUM1 108 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 CES5AQ6NT32 575 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 PMF1Q6P1K2 205 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 DNAJB7Q7Z6W7 309 aaPredicted RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 ERICH1Q86X53 443 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 CCDC170Q8IYT3 715 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 TRMT2BQ96GJ1 504 aaKnown RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 PPP1R13BQ96KQ4 1090 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 SLITRK1Q96PX8 696 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 GCNAQ96QF7 691 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 ASAH2Q9NR71 780 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 ADAMTS1Q9UHI8 967 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 MAGED2Q9UNF1 606 aaPredicted RBP13.88□□□□□ -0.19
TIMP1-201ENST00000218388 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
TIMP1-201ENST00000218388 MYO16Q9Y6X6 1858 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 TULP2O00295 520 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 DDX3XO00571 662 aaKnown RBP eCLIP13.87□□□□□ -0.195e-26■□□□□ 10.9
TIMP1-201ENST00000218388 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
TIMP1-201ENST00000218388 IPO7O95373 1038 aaKnown RBP13.87□□□□□ -0.19
TIMP1-201ENST00000218388 PAPLNO95428 1278 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 UNGP13051 313 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-201ENST00000218388 PTPN2P17706 415 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 FECHP22830 423 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 YWHAQP27348 245 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 RPL34P49207 117 aaKnown RBP13.87□□□□□ -0.19
TIMP1-201ENST00000218388 TKTL1P51854 596 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 KIF11P52732 1056 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 ADIGQ0VDE8 80 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-201ENST00000218388 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-201ENST00000218388 SLC18A3Q16572 532 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 RAB41Q5JT25 222 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 CYP4A22Q5TCH4 519 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 ACAD10Q6JQN1 1059 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 WDTC1Q8N5D0 677 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 GPR152Q8TDT2 470 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 CPA5Q8WXQ8 436 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 FBXO32Q969P5 355 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 TRIM11Q96F44 468 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 MYRFLQ96LU7 910 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 PCDHB18PQ96TA0 734 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 CHP1Q99653 195 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 TTLL2Q9BWV7 592 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 SLC4A5Q9BY07 1137 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 CNGB3Q9NQW8 809 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 STRIP2Q9ULQ0 834 aa13.87□□□□□ -0.19
TIMP1-201ENST00000218388 ZNF638Q14966 1978 aaKnown RBP13.86□□□□□ -0.19
TIMP1-201ENST00000218388 E5RJQ4 531 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 ZNF197O14709 1029 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 RTN2O75298 545 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 TBX10O75333 385 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 ZBED1O96006 694 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 CALB1P05937 261 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 LCP1P13796 627 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 CDC25CP30307 473 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 PPP3CCP48454 512 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 SPA17Q15506 151 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 PABPC1LQ4VXU2 614 aaKnown RBP13.86□□□□□ -0.19
TIMP1-201ENST00000218388 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
TIMP1-201ENST00000218388 GPR149Q86SP6 731 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 TMEM110Q86TL2 294 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 PHF13Q86YI8 300 aaPredicted RBP13.86□□□□□ -0.19
TIMP1-201ENST00000218388 SCML4Q8N228 414 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 ARHGAP18Q8N392 663 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 C12orf76Q8N812 135 aaPredicted RBP13.86□□□□□ -0.19
TIMP1-201ENST00000218388 SLC30A5Q8TAD4 765 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 OVCA2Q8WZ82 227 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 IRGQQ8WZA9 623 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 ZNF707Q96C28 371 aaPredicted RBP13.86□□□□□ -0.19
TIMP1-201ENST00000218388 C18orf8Q96DM3 657 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 CPXM1Q96SM3 734 aa13.86□□□□□ -0.19
TIMP1-201ENST00000218388 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms