RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 ZNF667Q5HYK9 610 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 HSPH1Q92598 858 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 BTBD10Q9BSF8 475 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 CALN1Q9BXU9 219 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 HEY2Q9UBP5 337 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 PCSK1NQ9UHG2 260 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 NUMBLQ9Y6R0 609 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 IGKV6-21A0A0C4DH24 114 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 A0A0G2JND7 137 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 ACKR2O00590 384 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 ENDOD1O94919 500 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 RXRBP28702 533 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 ARFIP2P53365 341 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 CDK16Q00536 496 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 OVGP1Q12889 678 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 TFDP2Q14188 446 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 KRT72Q14CN4 511 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 KBTBD12Q3ZCT8 623 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 ZNF772Q68DY9 489 aaPredicted RBP13.89□□□□□ -0.19
SRP54-201ENST00000216774 DARS2Q6PI48 645 aaKnown RBP13.89□□□□□ -0.19
SRP54-201ENST00000216774 ILDR2Q71H61 639 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 IGDCC3Q8IVU1 814 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 APBB2Q92870 758 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 SKA1Q96BD8 255 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 SERAC1Q96JX3 654 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 KLF6Q99612 283 aaPredicted RBP13.89□□□□□ -0.19
SRP54-201ENST00000216774 CORO1CQ9ULV4 474 aaPredicted RBP13.89□□□□□ -0.19
SRP54-201ENST00000216774 KBTBD13C9JR72 458 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.193e-23■■■■□ 22.6
SRP54-201ENST00000216774 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 RAP1GAPP47736 663 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 ZNF143P52747 638 aaPredicted RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 PTPN11Q06124 597 aaPredicted RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 ATF7IP2Q5U623 682 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 C4orf50Q6ZRC1 276 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 LRRC6Q86X45 466 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 TAB3Q8N5C8 712 aaPredicted RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 NSL1Q96IY1 281 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 MIPEPQ99797 713 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 KCNK13Q9HB14 408 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 CNTN3Q9P232 1028 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 HMGCRP04035 888 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 DLDP09622 509 aaKnown RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 TAF5Q15542 800 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 FAM91A1Q658Y4 838 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 SLC26A11Q86WA9 606 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 CNPY3Q9BT09 278 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 C12orf65Q9H3J6 166 aaKnown RBP13.88□□□□□ -0.19
SRP54-201ENST00000216774 FZD8Q9H461 694 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 PAK5Q9P286 719 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 ZNF180Q9UJW8 692 aa13.88□□□□□ -0.19
SRP54-201ENST00000216774 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.88□□□□□ -0.19
SRP54-201ENST00000216774 CILPO75339 1184 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 ENTPD5O75356 428 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 MICAL2O94851 1124 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 KRT19P08727 400 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 PYGBP11216 843 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 PAX7P23759 505 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 GCKP35557 465 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 PTDSS1P48651 473 aaKnown RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 YWHAGP61981 247 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRP54-201ENST00000216774 MTM1Q13496 603 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRP54-201ENST00000216774 TTC8Q8TAM2 541 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 RTP4Q96DX8 246 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 TMEM176AQ96HP8 235 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 FAM111AQ96PZ2 611 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 CAMKK2Q96RR4 588 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 SDCBP2Q9H190 292 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 MMADHCQ9H3L0 296 aaPredicted RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 RPF1Q9H9Y2 349 aaKnown RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 CYP3A43Q9HB55 503 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRP54-201ENST00000216774 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 AFG3L2Q9Y4W6 797 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 CFAP69A5D8W1 941 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 SERPINB3P29508 390 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 SERPINB4P48594 390 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 CDH8P55286 799 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 ZBTB16Q05516 673 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 TSNAXIP1Q2TAA8 658 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 DHX37Q8IY37 1157 aaKnown RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 FAF2Q96CS3 445 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 KLRG1Q96E93 195 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms