RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CCINQ13939 588 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 P3H1Q32P28 736 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 STRIP1Q5VSL9 837 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 LZTR1Q8N653 840 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CYFIP2Q96F07 1278 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 EDC3Q96F86 508 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 CNPY3Q9BT09 278 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 VEGFAP15692 232 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 CHN2P52757 468 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 ROR1Q01973 937 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CNGA3Q16281 694 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 C4orf22Q6V702 233 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 GATAD2AQ86YP4 633 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 DCLK3Q9C098 648 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 HMG20AQ9NP66 347 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 BTBD3Q9Y2F9 522 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 TBKBP1A7MCY6 615 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 LRRN2O75325 713 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 TGFBR2P37173 567 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 GGCXP38435 758 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 TERF2Q15554 542 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 NECAB2Q7Z6G3 386 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 MTG1Q9BT17 334 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 TTLL2Q9BWV7 592 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CAPS2Q9BXY5 557 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 NECTIN3Q9NQS3 549 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 IL1RAPL1Q9NZN1 696 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 FAM220BPB1ANY3 271 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 ATP5HO75947 161 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CRTAMO95727 393 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CSTBP04080 98 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 APLP1P51693 650 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 GEMP55040 296 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CACNB1Q02641 598 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 SPIDRQ14159 915 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CTTNQ14247 550 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 DEFB115Q30KQ5 88 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 SETD3Q86TU7 594 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 SYTL5Q8TDW5 730 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 KCNJ9Q92806 393 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 POLMQ9NP87 494 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 PFASO15067 1338 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 TRIM66O15016 1216 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 ZNF202O95125 648 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 IGSF6O95976 241 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 RPA1P27694 616 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CRKP46108 304 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 EIF3BP55884 814 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 GRB14Q14449 540 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 C11orf74Q86VG3 221 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 LDAHQ9H6V9 325 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 RDH8Q9NYR8 311 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 ARHGAP28Q9P2N2 729 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 XPO7Q9UIA9 1087 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 KCNJ14Q9UNX9 436 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 MEIS2O14770 477 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 STX11O75558 287 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 SMNDC1O75940 238 aaKnown RBP eCLIP3.56□□□□□ -1.84
NEB-201ENST00000172853 ALBP02768 609 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 FTLP02792 175 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 ACOX1Q15067 660 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PTGES3Q15185 160 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 INPP5DQ92835 1189 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 ZNF594Q96JF6 807 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 RIPOR3Q96MK2 946 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 RNF208Q9H0X6 261 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 SERHL2Q9H4I8 314 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 SERHLQ9NQF3 203 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PRMT7Q9NVM4 692 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 RWDD3Q9Y3V2 267 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PNMA6FA0A0J9YX94 578 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PLD2O14939 933 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CTNNB1P35222 781 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 STAT4Q14765 748 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 SNCBQ16143 134 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 COBLL1Q53SF7 1204 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PDSS1Q5T2R2 415 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PLCL2Q9UPR0 1127 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 DMTF1Q9Y222 760 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 MRPS33Q9Y291 106 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 GPSM3Q9Y4H4 160 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 CCDC22O60826 627 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 GIMD1P0DJR0 217 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 ITGALP20701 1170 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 GRIK3Q13003 919 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 FBXO38Q6PIJ6 1188 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 LINC00523Q86TU6 105 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 GPRASP2Q96D09 838 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 TIPINQ9BVW5 301 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 NDST4Q9H3R1 872 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 PNMA8BQ9ULN7 279 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 TBX22Q9Y458 520 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 RAPGEF6Q8TEU7 1601 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 SRP72O76094 671 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 STXBP1P61764 594 aaKnown RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 C4orf46Q504U0 113 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 OTUD7AQ8TE49 926 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 TCEAL3Q969E4 200 aa3.56□□□□□ -1.84
NEB-201ENST00000172853 DHTKD1Q96HY7 919 aaPredicted RBP3.56□□□□□ -1.84
NEB-201ENST00000172853 SAYSD1Q9NPB0 183 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms