RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 OtulinQ3UCV8 352 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Elf3Q3UPW2 391 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Syn2Q64332 586 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Prpf38bQ80SY5 542 aaKnown RBP10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Phactr3Q8BYK5 558 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dhx36Q8VHK9 1001 aaKnown RBP10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hkdc1Q91W97 915 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lrp8Q924X6 996 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q9CQC3 228 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Nudt8Q9CR24 210 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccnyl1D3YUJ3 367 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vmn2r59E9PUT5 865 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Serpinb3aG3X9V8 387 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Axin1O35625 863 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 YwhaeP62259 255 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gata5P97489 404 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Alkbh5Q3TSG4 395 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cd180Q62192 661 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Txndc8Q69AB2 127 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 PrcpQ7TMR0 491 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ppp1r12bQ8BG95 976 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pgm5Q8BZF8 567 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gpc3Q8CFZ4 579 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 DnerQ8JZM4 737 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Wbp11Q923D5 641 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Trim66Q924W6 1242 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Rpap3Q9D706 660 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 SerhlQ9EPB5 311 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Chrac1Q9JKP8 129 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Bace2Q9JL18 514 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Col4a3Q9QZS0 1669 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Abcb5B5X0E4 1255 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 EpoP07321 192 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hoxc6P10629 235 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mxi1P50540 228 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Atp11aP98197 1187 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 FAM120AQ6A0A9 1112 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Arhgap20Q6IFT4 1182 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Plppr4Q7TME0 766 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tmem74Q8BQU7 305 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccdc68Q8BVC4 333 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tor1aip2Q8BYU6 502 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccdc28bQ8CEG5 200 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lamtor4Q8CF66 99 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tp53inp2Q8CFU8 221 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 UvragQ8K245 698 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Alg9Q8VDI9 611 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 ChiaQ91XA9 473 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pcdhb1Q91Y08 818 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Copg2Q9QXK3 871 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ror1Q9Z139 937 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vmn2r25W4VSP2 855 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fndc3c1Q6DFV6 1356 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Smok3aC0HKC8 504 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Smok3bC0HKC9 504 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cdh16O88338 830 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tnnc2P20801 160 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 S100bP50114 92 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cntn3Q07409 1028 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccdc127Q3TC33 260 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccndbp1Q3TVC7 356 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 LbpQ61805 481 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Znf185Q62394 352 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Chsy1Q6ZQ11 800 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Zfp263Q8CF60 680 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 OgtQ8CGY8 1046 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 C8aQ8K182 587 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Acvr1cQ8K348 493 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lman1lQ8VCD3 505 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Olfr449Q8VGW8 311 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Adi1Q99JT9 179 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ssu72Q9CY97 194 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 MlklQ9D2Y4 472 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ubxn11Q9D572 484 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vwa7Q9JHA8 891 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Slc8a3S4R2P9 928 aa10.2□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cdr1E9Q0B4 517 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Krt90E9Q1Z0 538 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm5689F6Y2A6 97 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Farp1F8VPU2 1048 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Spin2fJ3QPU0 254 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm379J3QQ19 296 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vti1aO89116 217 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 AlplP09242 524 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Thumpd3P97770 505 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cyp2c67Q569X9 491 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mea1Q64327 174 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Acot5Q6Q2Z6 421 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fcho1Q8K285 873 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tgif2lx2Q8K5B9 231 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Bbs5Q9CZQ9 341 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mrps9Q9D7N3 390 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Abcg8Q9DBM0 673 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Slc12a4Q9JIS8 1085 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Zgrf1Q0VGT4 1863 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Grik3B1AS29 919 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 ChkaO54804 453 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 IapP03975 557 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pgk1P09411 417 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 YwhazP63101 245 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms