RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 ProcP33587 460 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Agbl1Q09M05 972 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dzip1lQ499E4 774 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm5168Q4KL04 211 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ctnna2Q61301 953 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tdpoz4Q6YCH2 370 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Olfr412Q7TRW7 312 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 PdhxQ8BKZ9 501 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Abraxas1Q8BPZ8 407 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Q8BZE1 841 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Colgalt1Q8K297 617 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ugt2b1Q8R084 529 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ace2Q8R0I0 805 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Timd2Q8R183 305 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rilpl2Q99LE1 197 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 MlxiplQ99MZ3 864 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pard3bQ9CSB4 1203 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cndp2Q9D1A2 475 aaKnown RBP9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rasgef1cQ9D300 466 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dcaf6Q9DC22 876 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Oxct2bQ9ESL0 520 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cpb2Q9JHH6 422 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Oxct2aQ9JJN4 520 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 NumbQ9QZS3 653 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Epm2aQ9WUA5 330 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Zfp384E9Q1A5 584 aaKnown RBP9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Spata31E9QAF0 1014 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fgf15O35622 218 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 H2afxP27661 143 aaKnown RBP9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vav1P27870 845 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Entpd7Q3TCT4 606 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cfhr2Q4LDF6 332 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fstl1Q62356 306 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 2700097O09RikQ6PGK3 301 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ntrk3Q6VNS1 825 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Olfr538Q7TRT5 310 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Bank1Q80VH0 783 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Eif2b5Q8CHW4 717 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pip4k2cQ91XU3 421 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 SncaipQ99ME3 962 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 GatmQ9D964 423 aaKnown RBP9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Krt27Q9Z320 448 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Col5a3Q9JLI2 1739 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm13941A2AJ38 245 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm5926E9PWJ8 236 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 C6E9Q6D8 931 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Lmod3E9QA62 571 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mup13L7N222 235 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Sypl2O89104 264 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Neurog2P70447 263 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Emc10Q3TAS6 258 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 FaxcQ3UMF9 409 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tmem26Q3UP23 366 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vps41Q5KU39 853 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 EfsQ64355 560 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gstt1Q64471 240 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Npas4Q8BGD7 802 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dars2Q8BIP0 653 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Apol9bQ8C7I4 310 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ccdc73Q8CDM4 1066 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Stau2Q8CJ67 570 aaKnown RBP9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Apol9aQ8VDU3 310 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Epn3Q91W69 636 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pcdhb1Q91Y08 818 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc13a3Q91Y63 600 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Senp2Q91ZX6 588 aa9.12□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pramef17A2ASJ1 475 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Apold1E9Q0X2 246 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm10722F6VLK5 217 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gabrb2P63137 512 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 HelqQ2VPA6 1069 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ubn1Q4G0F8 1135 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc20a1Q61609 681 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Xpo1Q6P5F9 1071 aaKnown RBP9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vwa2Q70UZ7 791 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pja2Q80U04 707 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Lrrc1Q80VQ1 524 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Arhgef33Q8BW86 850 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Svs3bQ8BZH8 265 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rassf9Q8K342 435 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Caskin2Q8VHK1 1201 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Sntg2Q925E0 539 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc39a3Q99K24 317 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tsnaxip1Q99P25 704 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rpl17Q9CPR4 184 aaKnown RBP9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mcur1Q9CXD6 340 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fgf22Q9ESS2 162 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gtf2ird1Q9JI57 1104 aaKnown RBP9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Scamp5Q9JKD3 235 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cetn2Q9R1K9 172 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 CitP49025 2055 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Kntc1Q8C3Y4 2207 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Osbpl9A2A8Z1 736 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 D3Z070 196 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Hes2O54792 157 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Per2O54943 1257 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Itm2bO89051 266 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Anxa5P48036 319 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ptpn18Q61152 453 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Smarcd1Q61466 515 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms