RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Sox30Q8CGW4 782 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Unc93b1Q8VCW4 598 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc12a9Q99MR3 914 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ly6iQ9WU67 134 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Abi3bpQ59IW6 1179 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 CpQ61147 1061 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Dnajc6Q80TZ3 938 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mcoln2Q8K595 566 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 ChiaQ91XA9 473 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tmem39aQ9CYC3 486 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 PtenO08586 403 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Wdr36Q3TAQ9 899 aaKnown RBP12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ripor1Q68FE6 1223 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Scd4Q6T707 353 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Klhl36Q8R124 613 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pglyrp2Q8VCS0 530 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gm3248K7N721 186 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gm3187M0QWW3 260 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Fbln1Q08879 705 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 SpdyaQ5IBH7 310 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc30a9Q5IRJ6 567 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Stambpl1Q76N33 436 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Spon2Q8BMS2 330 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ipo11Q8K2V6 975 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rfc5Q9D0F6 339 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 MceeQ9D1I5 178 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Klrc1Q9Z202 244 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slfn14V9GXG1 899 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Olfr391-psA0A0U1RNJ4 312 aa12.33□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Dcpp3L7N259 170 aa12.33□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Inpp1P49442 396 aa12.33□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lcp1Q61233 627 aaKnown RBP12.33□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pcdhb19Q91Y01 801 aa12.33□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nsmce3Q9CPR8 279 aa12.33□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gbp6A0A0G2JDV3 611 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Birc5O70201 140 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Aff1O88573 1216 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ptprn2P80560 1001 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Orc2Q60862 576 aaKnown RBP12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fam185aQ7TPD2 378 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Agbl2Q8CDK2 862 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fkbp6Q91XW8 327 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mettl16Q9CQG2 553 aaKnown RBP12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 XpotQ9CRT8 963 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ddx47Q9CWX9 455 aaKnown RBP12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 A0A1Y7VP24 259 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ttc23lA6H6E9 458 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ap3d1O54774 1199 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 NrlP54846 237 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 HmgcrQ01237 887 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Casc4Q6P2L7 435 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Galnt5Q8C102 930 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rasal3Q8C2K5 1041 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rabl3Q9D4V7 236 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dcun1d1Q9QZ73 259 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Scgb2b19J3QM75 112 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Stra6O70491 670 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Hcn2O88703 863 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Slc12a1P55014 1095 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cog7Q3UM29 770 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ndufaf2Q59J78 168 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ptpn14Q62130 1189 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Zdhhc17Q80TN5 632 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Phactr3Q8BYK5 558 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tldc1Q8K0P3 455 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dis3Q9CSH3 958 aaKnown RBP12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm4871D3Z0W7 314 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Raph1F2Z3U3 1266 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Hsd17b1P51656 344 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fbxw2Q60584 422 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 HiraQ61666 1015 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Znf512Q69Z99 562 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Enoph1Q8BGB7 257 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Abraxas1Q8BPZ8 407 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Lgi2Q8K4Z0 550 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Angel1Q8VCU0 667 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Arhgef25Q9CWR0 618 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Znf654Q9DAU9 571 aa12.33□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Klc2O88448 599 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Prom2Q3UUY6 835 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kdm7aQ3UWM4 940 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tmprss11eQ5S248 423 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mvb12bQ6KAU4 317 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Krt73Q6NXH9 539 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 D630039A03RikQ8K0M7 236 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Arfip2Q8K221 341 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tbc1d15Q9CXF4 671 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 NumbQ9QZS3 653 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Klhdc7aA2APT9 773 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Prom1O54990 867 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Slc1a2P43006 572 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pi4k2aQ2TBE6 479 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Serac1Q3U213 654 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Snx27Q3UHD6 539 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kctd19Q562E2 927 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rtl3Q6P1Y1 553 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rnaseh2bQ80ZV0 308 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 HnmtQ91VF2 295 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 AllcQ9JHX6 414 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm382B1AXN3 1250 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms