RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Scube2Q9JJS0 997 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Iqgap1Q9JKF1 1657 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cyp2d9P11714 504 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Hspa9P38647 679 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cct8P42932 548 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Msh2P43247 935 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Clcn3P51791 818 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Garnl3Q3V0G7 1038 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bcar1Q61140 874 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Zbtb33Q8BN78 671 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Senp7Q8BUH8 1037 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mterf4Q8BVN4 346 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slc9b1Q8C0X2 565 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 OgtQ8CGY8 1046 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Adam7O35227 789 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ppp4cP97470 307 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Far2Q7TNT2 515 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sel1l3Q80TS8 1137 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rilpl2Q99LE1 197 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 MceeQ9D1I5 178 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ccdc81Q9D5W4 654 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Echdc3Q9D7J9 300 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm13941A2AJ38 245 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rap1gapA2ALS5 663 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dennd5bA2RSQ0 1274 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 F830016B08RikG3UWE2 416 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bmpr2O35607 1038 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ap3d1O54774 1199 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tpst1O70281 370 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rab17P35292 214 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam172aQ3TNH5 417 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Xlr3bQ6P205 226 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ap1s3Q7TN05 154 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 NrcamQ810U4 1256 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Znf879Q8BI99 563 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr1414Q8VGU5 312 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cyp2c70Q91W64 489 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ifi202Q9R002 445 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Arih1Q9Z1K5 555 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Zfyve9A2A8R0 1397 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tmem237Q3V0J1 427 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Smndc1Q8BGT7 238 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 HlcsQ920N2 722 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mrpl1Q99N96 336 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Msh5Q9QUM7 833 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rims2Q9EQZ7 1530 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Pdzrn4E9PUZ9 1014 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trim15G3UY57 292 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 PtenO08586 403 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Arl13bQ640N2 427 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Raver2Q7TPD6 673 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Siglec10Q80ZE3 688 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Atg14Q8CDJ3 492 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Kct2Q8K201 259 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gtf2a1lQ8R4I4 468 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trim13Q9CYB0 407 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Angpt2O35608 496 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Guca1aP43081 202 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rpl10aP53026 217 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cyp2c39P56656 490 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 IgfalsP70389 603 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Aqp1Q02013 269 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 4930430A15RikQ05AC5 485 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Zc3hav1Q3UPF5 946 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Q9D1F3 157 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nup50Q9JIH2 466 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Abca8bQ8K440 1620 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Lcn6A2AJB9 181 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup10A2BIN1 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup14A2CEK7 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup19A9C497 187 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup15A9R9W0 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rrn3B2RS91 656 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup17B5X0G2 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup8E9PVW0 235 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup7E9QA79 235 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Vmn2r77L7N2B7 854 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup6P02762 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup1P11588 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup2P11589 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Psmc6P62334 389 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Smad5P97454 465 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nt5c2Q3V1L4 560 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gemin4Q6P6L6 1058 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Zmym6Q8BS54 1249 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 XpotQ9CRT8 963 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam111aQ9D2L9 613 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 RalbQ9JIW9 206 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bmp15Q9Z0L4 392 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 HaspinQ9Z0R0 754 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 PtprtQ99M80 1454 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Kiaa0232Q80U59 1396 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Vwa5b1A9Z1V5 1215 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Itga9B8JK39 1036 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Stmn3O70166 180 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Odc1P00860 461 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sec23aQ01405 765 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Brd9Q3UQU0 596 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Npdc1Q64322 332 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 WlsQ6DID7 541 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms