RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 AticQ9CWJ9 592 aaKnown RBP15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ppp1r12aQ9DBR7 1029 aaKnown RBP15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Nudt5Q9JKX6 218 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Zfc3h1B2RT41 1992 aaKnown RBP15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Lrriq4A6H6A4 596 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Krt90E9Q1Z0 538 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Tspyl1O88852 379 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Hoxc6P10629 235 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 YwhazP63101 245 aaKnown RBP15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ripply1Q2WG77 201 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 OtulinQ3UCV8 352 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ttc9Q3V038 219 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Tmcc1Q69ZZ6 649 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Dzip3Q7TPV2 1204 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ahcyl1Q80SW1 530 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ppme1Q8BVQ5 386 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gga1Q8R0H9 635 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 RnpepQ8VCT3 650 aaKnown RBP15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Olfr449Q8VGW8 311 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Cd248Q91V98 765 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Nsmce3Q9CPR8 279 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 MtrexQ9CZU3 1040 aaKnown RBP15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Mageb3Q9D2H4 330 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ttc33Q9D6K7 262 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Paip2Q9D6V8 124 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Rpap3Q9D706 660 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Trpc3Q9QZC1 836 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ptpn4Q9WU22 926 aa15.62■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gm20509G3UZF1 325 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Serpini1O35684 410 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Mxi1P50540 228 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Sesn2P58043 480 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ranbp9P69566 653 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Marveld2Q3UZP0 555 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gm11437Q5QR91 290 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Grid2Q61625 1007 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Vil1Q62468 827 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Dars2Q8BIP0 653 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Caap1Q8VDY9 356 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Tekt2Q922G7 430 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Polr3cQ9D483 533 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Mrpl4Q9DCU6 294 aaKnown RBP15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Caln1Q9JJG7 219 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Cpsf3Q9QXK7 684 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gm29133A0A1B0GT72 266 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Kcng2F7A6P6 480 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Stmn2P55821 179 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ly9Q01965 654 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 LdhdQ7TNG8 484 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Olfr299Q7TS05 330 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Elac2Q80Y81 831 aaKnown RBP15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Exoc3l1Q8BI71 739 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Eif2aQ8BJW6 581 aaKnown RBP15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 OgtQ8CGY8 1046 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ndfip2Q91ZP6 311 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Vwa7Q9JHA8 891 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Tmod4Q9JLH8 345 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Tnfsf13bQ9WU72 309 aa15.61■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ms4a14A0A087WSD2 1232 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ankfn1A0A140LIW7 1083 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gm11985A0A1B0GS61 206 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gm12394A2AKP6 982 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Olfr1305A2AVW3 312 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Kpna7C0LLJ0 499 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gm3371F7CQW8 167 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gsta3P30115 221 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Map3k9Q3U1V8 1077 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Lrch2Q3UMG5 773 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 ScapQ6GQT6 1276 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Arhgef18Q6P9R4 1021 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Garem2Q6PAJ3 880 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 SrlQ7TQ48 910 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Olfr670Q7TRP3 312 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Pgm5Q8BZF8 567 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 GlmnQ8BZM1 596 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Rfx6Q8C7R7 927 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Trip10Q8CJ53 603 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Smyd2Q8R5A0 433 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 TfQ921I1 697 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Drc3Q9D5E4 523 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Capn7Q9R1S8 813 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ror1Q9Z139 937 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Atp8b4A2ANX3 1194 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Tatdn2B7ZNL9 783 aaKnown RBP15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Speer4f2E9Q366 295 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Pgk1P09411 417 aaKnown RBP15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 ItgavP43406 1044 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 SftpdP50404 374 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Scarf2P59222 833 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Gata5P97489 404 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 RalgdsQ03385 852 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Q3TQQ9 903 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 B3gnt3Q5JCS9 372 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Wdr35Q8BND3 1181 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Trub1Q8C0D0 338 aaKnown RBP15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Prpf31Q8CCF0 499 aaKnown RBP15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Cog3Q8CI04 820 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Ddx39aQ8VDW0 427 aaKnown RBP15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Pomgnt1Q91X88 660 aa15.6■□□□□ 0.09
Nup54-201ENSMUST00000038514 Mcrs1Q99L90 462 aa15.6■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms