RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gnl1P36916 607 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Psmc1P62192 440 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Sh3bp2Q06649 559 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rcsd1Q3UZA1 412 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Lsm8Q6ZWM4 96 aaKnown RBP13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Dnajc6Q80TZ3 938 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Nat14Q8BVG8 206 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Lrrc19Q8BZT5 364 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Smyd2Q8R5A0 433 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Q9CQC3 228 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 TtpalQ9D3D0 343 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Zfc3h1B2RT41 1992 aaKnown RBP13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ripor3A1L3T7 938 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 StrnO55106 780 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tfap2aP34056 437 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Scarf2P59222 833 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Alkbh5Q3TSG4 395 aaKnown RBP13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 LbpQ61805 481 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Znf185Q62394 352 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Fam107aQ78TU8 144 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Exoc3l1Q8BI71 739 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ptrh1Q8BW00 204 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Stard7Q8R1R3 373 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Trpv6Q91WD2 767 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 SmtnQ921U8 923 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 CmasQ99KK2 432 aaKnown RBP13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tdrd1Q99MV1 1172 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tssk3Q9D2E1 268 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ubxn11Q9D572 484 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Psmg1Q9JK23 289 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 PapolbQ9WVP6 641 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Vmn2r25W4VSP2 855 aa13.99□□□□□ -0.17
Nup88-201ENSMUST00000035283 Zbed6D2EAC2 980 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Apold1E9Q0X2 246 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gm20721E9Q2U8 318 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gm4841E9QAA8 417 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Vav1P27870 845 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gsta3P30115 221 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Cst8P32766 142 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 NppbP40753 121 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rab6bP61294 208 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Zfp953Q3UPV7 304 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 ScapQ6GQT6 1276 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gabbr2Q80T41 940 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mical2Q8BML1 960 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ccdc159Q8C963 411 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gpc3Q8CFZ4 579 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Trim61Q8JZK6 461 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pcdha9Q91Y11 979 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Lpin3Q99PI4 848 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Nde1Q9CZA6 344 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Scyl1Q9EQC5 806 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Zc3h12bG3X9I7 835 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Vmn2r39L7N2E5 861 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Grpel2O88396 224 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pgk1P09411 417 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Cyp2a4P15392 494 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Cyp2a5P20852 494 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 GsrP47791 500 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 YwhazP63101 245 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Cdh8P97291 799 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Q3UE31 404 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tars2Q3UQ84 723 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Samhd1Q60710 627 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Hif1aQ61221 836 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 ItpkcQ7TS72 678 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Slc4a7Q8BTY2 1034 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Bmt2Q8BXK4 403 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Bri3bpQ8BXV2 253 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Tmem132cQ8CEF9 1099 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rpp40Q8R1F9 363 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 ChiaQ91XA9 473 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Taf11Q99JX1 211 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Actr3Q99JY9 418 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ino80bQ99PT3 375 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 MtrexQ9CZU3 1040 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Lima1Q9ERG0 753 aaKnown RBP13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 PorcnQ9JJJ7 461 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pdpk1Q9Z2A0 559 aa13.98□□□□□ -0.17
Nup88-201ENSMUST00000035283 Trip11E9Q512 1976 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pgap3A2A559 320 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ebf3O08791 596 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Map4k1P70218 827 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Utp14bQ6EJB6 756 aaKnown RBP13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Nyap1Q6PFX7 833 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Usp6nlQ80XC3 819 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Zfp454Q80Y34 536 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Fbxw8Q8BIA4 598 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Syt15Q8C6N3 418 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Col23a1Q8K4G2 532 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Clptm1Q8VBZ3 664 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Med10Q9CXU0 135 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Oma1Q9D8H7 521 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Vwa7Q9JHA8 891 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Cdr2lA2A6T1 465 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Arhgef10lA2AWP8 1280 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ism2D3Z6A3 493 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Spin2fJ3QPU0 254 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 Nek2O35942 443 aa13.97□□□□□ -0.17
Nup88-201ENSMUST00000035283 ChkaO54804 453 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms