RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Znf445Q8R2V3 986 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Prrc2bQ7TPM1 1486 aaKnown RBP12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 TnnQ80Z71 1560 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Acnat1A2AKK5 416 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Mtnd4P03911 459 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 GabrdP22933 449 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Parp6Q6P6P7 630 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Fam185aQ7TPD2 378 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Tarsl2Q8BLY2 790 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Plin5Q8BVZ1 463 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Sfrp1Q8C4U3 314 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Lin52Q8CD94 116 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Prkag2Q91WG5 566 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Pkp2Q9CQ73 795 aaKnown RBP12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Tdrd12Q9CWU0 1215 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Sfmbt1Q9JMD1 863 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Msh5Q9QUM7 833 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ccne2Q9Z238 404 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 RerglB2RVE2 204 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ifi213D3Z5G0 586 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Nat1P50294 290 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Aars2Q14CH7 980 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ugt3a1Q3UP75 523 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Plcl1Q3USB7 1096 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gga3Q8BMI3 718 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Q8BWQ6 963 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Pak5Q8C015 719 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gpc3Q8CFZ4 579 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Vmn1r214Q8R279 367 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Pacsin3Q99JB8 424 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Mcm8Q9CWV1 833 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Tssk3Q9D2E1 268 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Rab11fip1Q9D620 645 aa12.62□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gm45233A0A0N4SVE0 221 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ccdc163A2AGD7 326 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Scgb2b19J3QM75 112 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 EgfrQ01279 1210 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Atp6v1hQ8BVE3 483 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Lca5lQ8C0X0 741 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 NcaldQ91X97 193 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Hspa12bQ9CZJ2 685 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Tubgcp4Q9D4F8 667 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Edf1Q9JMG1 148 aaKnown RBP12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 H2afyQ9QZQ8 372 aaKnown RBP12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Htra1Q9R118 480 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Eya4Q9Z191 616 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Mbd2Q9Z2E1 414 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Scgb2b12S4R2L0 112 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gm28168A0A087WNP1 180 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ccdc149F6V035 524 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Kpna4O35343 521 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 AcadsQ07417 412 aaKnown RBP12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 SpoplQ2M2N2 392 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Clhc1Q5M6W3 596 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Dph1Q5NCQ5 438 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Fam120bQ6RI63 786 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Foxo6Q70KY4 559 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Zfp398Q8BV16 643 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Serpina3bQ8BYY9 420 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Pkn3Q8K045 878 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Caskin2Q8VHK1 1201 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Castor1Q9CWQ8 331 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gtf2h1Q9DBA9 547 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Epb41l1Q9Z2H5 879 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gucy2dA0A0U1RPR8 1117 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Ddi2A2ADY9 399 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Atp8b4A2ANX3 1194 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 S100zB9EJL3 99 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 H2-M9O19442 342 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Aldh3a2P47740 484 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 RenbpP82343 430 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Kcnq3Q8K3F6 873 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Mta3Q924K8 591 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gm17175E9Q528 179 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 CatspereP0DP43 985 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Elk4P41158 430 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Defa8P50706 81 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Cyp2c37P56654 490 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gpbp1l1Q6NZP2 473 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 BC048507Q80ZS7 89 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Mrps35Q8BJZ4 320 aaKnown RBP12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Psd4Q8BLR5 1005 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Camk1dQ8BW96 385 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Mrgprx1Q8CIP3 322 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 H2bfmQ9DAB5 224 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Dnajc12Q9R022 198 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gabbr1Q9WV18 960 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 P2rx7Q9Z1M0 595 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Nup160Q9Z0W3 1402 aaKnown RBP12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Rnf123Q5XPI3 1314 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Plb1Q3TTY0 1478 aa12.61□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Kdm6aO70546 1401 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gm21488A0A087WR99 222 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Gm5592Q3V0A6 857 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Stxbp2Q64324 593 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Casc4Q6P2L7 435 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Tmem179Q8BHH9 233 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Atp6v1g3Q8BMC1 118 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Fig4Q91WF7 907 aa12.6□□□□□ -0.39
Pcdhac1-201ENSMUST00000007584 Creld1Q91XD7 420 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms