RNA–Protein interactions for RNA: YPR163C

TIF3, Transcript of Translation initiation factor eIF-4B, yeast

Gene TIF3, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF3	YPR163C	SLO1	Q3E784	85 aa		6.03	□□□□□ -1.44
TIF3	YPR163C	CPR1	P14832	162 aa	Known RBP	6.02	□□□□□ -1.45
TIF3	YPR163C	AGE2	P40529	298 aa		6.02	□□□□□ -1.45
TIF3	YPR163C	SRL1	Q08673	210 aa		6.02	□□□□□ -1.45
TIF3	YPR163C	MET32	Q12041	191 aa		6.02	□□□□□ -1.45
TIF3	YPR163C	YPR013C	Q12145	317 aa		6.02	□□□□□ -1.45
TIF3	YPR163C	YER135C	P40082	130 aa		6.01	□□□□□ -1.45
TIF3	YPR163C	CAX4	P53223	239 aa		6.01	□□□□□ -1.45
TIF3	YPR163C	AIM11	P87275	137 aa		6.01	□□□□□ -1.45
TIF3	YPR163C	PRM3	Q08931	133 aa		6.01	□□□□□ -1.45
TIF3	YPR163C	RPL16B	P26785	198 aa	Known RBP	6	□□□□□ -1.45
TIF3	YPR163C	AIM34	Q03673	198 aa		6	□□□□□ -1.45
TIF3	YPR163C	YLR194C	Q05777	254 aa		6	□□□□□ -1.45
TIF3	YPR163C	CCW14	O13547	238 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	NHP2	P32495	156 aa	Predicted RBP	5.99	□□□□□ -1.45
TIF3	YPR163C	YPT53	P36019	220 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	POP7	P38291	140 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	CIN5	P40917	295 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	YNR077C	P53758	84 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	SCW10	Q04951	389 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	BPH1	P25356	2167 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	RPS8A	P0CX39	200 aa	Known RBP	5.99	□□□□□ -1.45
TIF3	YPR163C	RPS8B	P0CX40	200 aa	Known RBP	5.99	□□□□□ -1.45
TIF3	YPR163C	ATP15	P21306	62 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	YEL067C	P39978	195 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	YFR057W	P43625	151 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	EOS1	P53938	366 aa		5.99	□□□□□ -1.45
TIF3	YPR163C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
TIF3	YPR163C	YDL022C-A	P0C5L6	82 aa		5.98	□□□□□ -1.45
TIF3	YPR163C	YJR146W	P47174	117 aa		5.98	□□□□□ -1.45
TIF3	YPR163C	YMR244W	Q04018	355 aa		5.98	□□□□□ -1.45
TIF3	YPR163C	LSM6	Q06406	86 aa	Known RBP	5.98	□□□□□ -1.45
TIF3	YPR163C	YLR042C	Q07990	161 aa		5.98	□□□□□ -1.45
TIF3	YPR163C	MSA1	Q08471	629 aa		5.98	□□□□□ -1.45
TIF3	YPR163C	CDC43	P18898	376 aa		5.97	□□□□□ -1.45
TIF3	YPR163C	RPB9	P27999	122 aa		5.97	□□□□□ -1.45
TIF3	YPR163C	MIG3	P39943	394 aa		5.97	□□□□□ -1.45
TIF3	YPR163C	VHS2	P40463	436 aa		5.97	□□□□□ -1.45
TIF3	YPR163C	SIM1	P40472	476 aa		5.97	□□□□□ -1.45
TIF3	YPR163C	MRPS8	Q03799	155 aa		5.97	□□□□□ -1.45
TIF3	YPR163C	TRP1	P00912	224 aa		5.96	□□□□□ -1.46
TIF3	YPR163C	RPL15A	P05748	204 aa	Known RBP	5.96	□□□□□ -1.46
TIF3	YPR163C	RPL16A	P26784	199 aa	Known RBP	5.96	□□□□□ -1.46
TIF3	YPR163C	YER085C	P40058	173 aa		5.96	□□□□□ -1.46
TIF3	YPR163C	PEX17	P40155	199 aa		5.96	□□□□□ -1.46
TIF3	YPR163C	YCH1	P42937	148 aa		5.96	□□□□□ -1.46
TIF3	YPR163C	YBR209W	P38311	105 aa		5.95	□□□□□ -1.46
TIF3	YPR163C	ATX1	P38636	73 aa		5.95	□□□□□ -1.46
TIF3	YPR163C	CYC7	P00045	113 aa		5.94	□□□□□ -1.46
TIF3	YPR163C	RPL18A	P0CX49	186 aa	Known RBP	5.94	□□□□□ -1.46
TIF3	YPR163C	RPL18B	P0CX50	186 aa	Known RBP	5.94	□□□□□ -1.46
TIF3	YPR163C	VTC1	P40046	129 aa	RIP-Chip data	5.94	□□□□□ -1.46	not detected
TIF3	YPR163C	ALG13	P53178	202 aa		5.94	□□□□□ -1.46
TIF3	YPR163C	HPA2	Q06592	156 aa		5.94	□□□□□ -1.46
TIF3	YPR163C	URA2	P07259	2214 aa	Known RBP	5.93	□□□□□ -1.46
TIF3	YPR163C	RPL28	P02406	149 aa	Known RBP	5.93	□□□□□ -1.46
TIF3	YPR163C	RRT13	P40042	185 aa		5.93	□□□□□ -1.46
TIF3	YPR163C	MRPL23	Q12487	163 aa	Predicted RBP	5.93	□□□□□ -1.46
TIF3	YPR163C	YER145C-A	A0A023PYF4	145 aa		5.92	□□□□□ -1.46
TIF3	YPR163C	YCR041W	P37265	110 aa		5.92	□□□□□ -1.46
TIF3	YPR163C	SHU1	P38751	150 aa		5.92	□□□□□ -1.46
TIF3	YPR163C	PMP3	P87284	55 aa		5.92	□□□□□ -1.46
TIF3	YPR163C	YCL021W-A	Q96VH3	125 aa		5.92	□□□□□ -1.46
TIF3	YPR163C	OST2	P46964	130 aa		5.91	□□□□□ -1.46
TIF3	YPR163C	RPL2A	P0CX45	254 aa	Known RBP	5.9	□□□□□ -1.47
TIF3	YPR163C	RPL2B	P0CX46	254 aa	Known RBP	5.9	□□□□□ -1.47
TIF3	YPR163C	UGX2	P32772	223 aa		5.9	□□□□□ -1.47
TIF3	YPR163C	YGL088W	P53151	121 aa		5.9	□□□□□ -1.47
TIF3	YPR163C	QCR8	P08525	94 aa		5.89	□□□□□ -1.47
TIF3	YPR163C	RPS11A	P0CX47	156 aa	Known RBP	5.89	□□□□□ -1.47
TIF3	YPR163C	RPS11B	P0CX48	156 aa	Known RBP	5.89	□□□□□ -1.47
TIF3	YPR163C	YIL059C	P40520	121 aa		5.89	□□□□□ -1.47
TIF3	YPR163C	MRPS12	P53732	153 aa		5.89	□□□□□ -1.47
TIF3	YPR163C	TAR1	Q8TGM6	124 aa		5.89	□□□□□ -1.47
TIF3	YPR163C	MID2	P36027	376 aa		5.88	□□□□□ -1.47
TIF3	YPR163C	YHR130C	P38834	111 aa		5.88	□□□□□ -1.47
TIF3	YPR163C	YEL008W	P40001	126 aa		5.88	□□□□□ -1.47
TIF3	YPR163C	YFR035C	P43608	114 aa		5.88	□□□□□ -1.47
TIF3	YPR163C	INO4	P13902	151 aa		5.86	□□□□□ -1.47
TIF3	YPR163C	MPC2	P38857	129 aa		5.86	□□□□□ -1.47
TIF3	YPR163C	FIP1	P45976	327 aa		5.86	□□□□□ -1.47
TIF3	YPR163C	YNL190W	P53872	204 aa		5.86	□□□□□ -1.47
TIF3	YPR163C	PPT2	Q12036	173 aa		5.86	□□□□□ -1.47
TIF3	YPR163C	UBC5	P15732	148 aa		5.85	□□□□□ -1.47
TIF3	YPR163C	NRG2	P38082	220 aa		5.85	□□□□□ -1.47
TIF3	YPR163C	YAR029W	P39549	74 aa		5.85	□□□□□ -1.47
TIF3	YPR163C	YCR075W-A	Q3E830	75 aa		5.85	□□□□□ -1.47
TIF3	YPR163C	YBR126W-A	Q8TGU7	68 aa		5.85	□□□□□ -1.47
TIF3	YPR163C	YHR212W-A	P0CX91	67 aa		5.84	□□□□□ -1.47
TIF3	YPR163C	COX10	P21592	462 aa		5.84	□□□□□ -1.47
TIF3	YPR163C	RPA12	P32529	125 aa	Known RBP	5.84	□□□□□ -1.47
TIF3	YPR163C	ABF2	Q02486	183 aa		5.84	□□□□□ -1.47
TIF3	YPR163C	ARC15	P40518	154 aa	RIP-Chip data	5.83	□□□□□ -1.48	not detected
TIF3	YPR163C	YDL186W	P48568	277 aa		5.83	□□□□□ -1.48
TIF3	YPR163C	YPS5	P53057	165 aa		5.83	□□□□□ -1.48
TIF3	YPR163C	ISD11	Q6Q560	94 aa		5.83	□□□□□ -1.48
TIF3	YPR163C	YIA6	P40556	373 aa		5.82	□□□□□ -1.48
TIF3	YPR163C	YBR144C	P34215	104 aa		5.81	□□□□□ -1.48
TIF3	YPR163C	YCR085W	P25650	117 aa		5.8	□□□□□ -1.48
TIF3	YPR163C	DSE2	P38844	325 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms