RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	YPL261C	Q08976	102 aa		4.3	□□□□□ -1.72
RBD2	YPL246C	YKL023C-A	Q2V2P3	75 aa		4.3	□□□□□ -1.72
RBD2	YPL246C	YNL146C-A	Q3E7Z1	64 aa		4.3	□□□□□ -1.72
RBD2	YPL246C	TAR1	Q8TGM6	124 aa		4.3	□□□□□ -1.72
RBD2	YPL246C	ADH1	P00330	348 aa	Known RBP	4.29	□□□□□ -1.72
RBD2	YPL246C	PAI3	P01094	68 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	RPL16B	P26785	198 aa	Known RBP	4.29	□□□□□ -1.72
RBD2	YPL246C	YKR041W	P36134	250 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	OXA1	P39952	402 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	SIM1	P40472	476 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	AIM11	P87275	137 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	ELC1	Q03071	99 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	HOR7	Q05827	59 aa		4.29	□□□□□ -1.72
RBD2	YPL246C	RPL42A	P0CX27	106 aa	Known RBP	4.28	□□□□□ -1.72
RBD2	YPL246C	RPL42B	P0CX28	106 aa	Known RBP	4.28	□□□□□ -1.72
RBD2	YPL246C	RPL32	P38061	130 aa	Known RBP	4.28	□□□□□ -1.72
RBD2	YPL246C	MIG3	P39943	394 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	DCV1	P43595	202 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	ABM1	P47146	123 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	YJR146W	P47174	117 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	YMR244W	Q04018	355 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	SPG4	Q04438	115 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	SCW10	Q04951	389 aa		4.28	□□□□□ -1.72
RBD2	YPL246C	RPL16A	P26784	199 aa	Known RBP	4.27	□□□□□ -1.73
RBD2	YPL246C	YCR041W	P37265	110 aa		4.27	□□□□□ -1.73
RBD2	YPL246C	FIP1	P45976	327 aa		4.27	□□□□□ -1.73
RBD2	YPL246C	SPO24	Q3E752	67 aa		4.27	□□□□□ -1.73
RBD2	YPL246C	RPS8A	P0CX39	200 aa	Known RBP	4.26	□□□□□ -1.73
RBD2	YPL246C	RPS8B	P0CX40	200 aa	Known RBP	4.26	□□□□□ -1.73
RBD2	YPL246C	ANB1	P19211	157 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	ATP15	P21306	62 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	AIM29	P36154	155 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	CIN5	P40917	295 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	MRPS8	Q03799	155 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	YLR042C	Q07990	161 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	SRL1	Q08673	210 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	YOR097C	Q12274	175 aa	Predicted RBP	4.26	□□□□□ -1.73
RBD2	YPL246C	YOR008C-A	Q3E7B9	74 aa		4.26	□□□□□ -1.73
RBD2	YPL246C	Q0255	P03881	472 aa		4.25	□□□□□ -1.73
RBD2	YPL246C	HYP2	P23301	157 aa	Known RBP	4.25	□□□□□ -1.73
RBD2	YPL246C	AGE2	P40529	298 aa		4.25	□□□□□ -1.73
RBD2	YPL246C	KEG1	P43614	200 aa		4.25	□□□□□ -1.73
RBD2	YPL246C	ARO2	P28777	376 aa	Known RBP	4.24	□□□□□ -1.73
RBD2	YPL246C	RRT13	P40042	185 aa		4.24	□□□□□ -1.73
RBD2	YPL246C	YER181C	P40097	107 aa		4.24	□□□□□ -1.73
RBD2	YPL246C	VHS2	P40463	436 aa		4.24	□□□□□ -1.73
RBD2	YPL246C	MRPS12	P53732	153 aa		4.24	□□□□□ -1.73
RBD2	YPL246C	YNL190W	P53872	204 aa		4.24	□□□□□ -1.73
RBD2	YPL246C	MRPL23	Q12487	163 aa	Predicted RBP	4.24	□□□□□ -1.73
RBD2	YPL246C	RPL28	P02406	149 aa	Known RBP	4.23	□□□□□ -1.73
RBD2	YPL246C	RPL43A	P0CX25	92 aa	Known RBP	4.23	□□□□□ -1.73
RBD2	YPL246C	RPL43B	P0CX26	92 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	YER085C	P40058	173 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	YGL088W	P53151	121 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	YLR194C	Q05777	254 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	PRM3	Q08931	133 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	SLO1	Q3E784	85 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	IGO2	Q9P305	131 aa		4.23	□□□□□ -1.73
RBD2	YPL246C	YER145C-A	A0A023PYF4	145 aa		4.22	□□□□□ -1.73
RBD2	YPL246C	MID2	P36027	376 aa		4.22	□□□□□ -1.73
RBD2	YPL246C	YNL217W	P40152	326 aa		4.21	□□□□□ -1.74
RBD2	YPL246C	RRG8	Q06109	277 aa		4.21	□□□□□ -1.74
RBD2	YPL246C	RPL18A	P0CX49	186 aa	Known RBP	4.2	□□□□□ -1.74
RBD2	YPL246C	RPL18B	P0CX50	186 aa	Known RBP	4.2	□□□□□ -1.74
RBD2	YPL246C	RPB9	P27999	122 aa		4.2	□□□□□ -1.74
RBD2	YPL246C	YBR209W	P38311	105 aa		4.2	□□□□□ -1.74
RBD2	YPL246C	YEL008W	P40001	126 aa		4.2	□□□□□ -1.74
RBD2	YPL246C	LSM6	Q06406	86 aa	Known RBP	4.2	□□□□□ -1.74
RBD2	YPL246C	YPL257W	Q08974	193 aa		4.2	□□□□□ -1.74
RBD2	YPL246C	TRP1	P00912	224 aa		4.19	□□□□□ -1.74
RBD2	YPL246C	UGX2	P32772	223 aa		4.19	□□□□□ -1.74
RBD2	YPL246C	CCW14	O13547	238 aa		4.18	□□□□□ -1.74
RBD2	YPL246C	POP7	P38291	140 aa		4.18	□□□□□ -1.74
RBD2	YPL246C	RPL15A	P05748	204 aa	Known RBP	4.17	□□□□□ -1.74
RBD2	YPL246C	YHR212W-A	P0CX91	67 aa		4.17	□□□□□ -1.74
RBD2	YPL246C	NHP2	P32495	156 aa	Predicted RBP	4.17	□□□□□ -1.74
RBD2	YPL246C	PEX17	P40155	199 aa		4.17	□□□□□ -1.74
RBD2	YPL246C	RPL2A	P0CX45	254 aa	Known RBP	4.16	□□□□□ -1.74
RBD2	YPL246C	RPL2B	P0CX46	254 aa	Known RBP	4.16	□□□□□ -1.74
RBD2	YPL246C	RPS11A	P0CX47	156 aa	Known RBP	4.16	□□□□□ -1.74
RBD2	YPL246C	RPS11B	P0CX48	156 aa	Known RBP	4.16	□□□□□ -1.74
RBD2	YPL246C	UBC5	P15732	148 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	YBR219C	P38317	127 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	SHU1	P38751	150 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	KRE9	P39005	276 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	YIL059C	P40520	121 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	OST2	P46964	130 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	YPS5	P53057	165 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	ALG13	P53178	202 aa		4.16	□□□□□ -1.74
RBD2	YPL246C	RPA12	P32529	125 aa	Known RBP	4.15	□□□□□ -1.75
RBD2	YPL246C	YIA6	P40556	373 aa		4.14	□□□□□ -1.75
RBD2	YPL246C	YCH1	P42937	148 aa		4.14	□□□□□ -1.75
RBD2	YPL246C	HPA2	Q06592	156 aa		4.14	□□□□□ -1.75
RBD2	YPL246C	YCL021W-A	Q96VH3	125 aa		4.14	□□□□□ -1.75
RBD2	YPL246C	NUM1	Q00402	2748 aa		4.14	□□□□□ -1.75
RBD2	YPL246C	INO4	P13902	151 aa		4.13	□□□□□ -1.75
RBD2	YPL246C	ATX1	P38636	73 aa		4.13	□□□□□ -1.75
RBD2	YPL246C	YMR295C	Q03559	197 aa		4.13	□□□□□ -1.75
RBD2	YPL246C	UTP20	P35194	2493 aa	Known RBP	4.13	□□□□□ -1.75
RBD2	YPL246C	YCR043C	P25361	127 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms