RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W FYV7Q12247 151 aa1.1□□□□□ -2.23
SRL1YOR247W CCW14O13547 238 aa1.08□□□□□ -2.24
SRL1YOR247W IMP2P46972 177 aa1.08□□□□□ -2.24
SRL1YOR247W URA2P07259 2214 aaKnown RBP1.07□□□□□ -2.24
SRL1YOR247W KRE5P22023 1365 aa1.07□□□□□ -2.24
SRL1YOR247W GEA1P47102 1408 aaPredicted RBP1.06□□□□□ -2.24
SRL1YOR247W TY1B-HO13535 1793 aa1.06□□□□□ -2.24
SRL1YOR247W MIX14Q04341 121 aa1.06□□□□□ -2.24
SRL1YOR247W KOG1P38873 1557 aa1.04□□□□□ -2.24
SRL1YOR247W SEC16P48415 2195 aaKnown RBP1.04□□□□□ -2.24
SRL1YOR247W YIL086CP40503 102 aa1.04□□□□□ -2.24
SRL1YOR247W COX12Q01519 83 aa1.04□□□□□ -2.24
SRL1YOR247W YPL038W-AQ3E7B4 63 aa1.04□□□□□ -2.24
SRL1YOR247W TY3B-IQ7LHG5 1498 aaKnown RBP1.04□□□□□ -2.24
SRL1YOR247W COX19Q3E731 98 aa1.03□□□□□ -2.24
SRL1YOR247W YBR072C-AQ3E794 53 aa1.03□□□□□ -2.24
SRL1YOR247W GEA2P39993 1459 aaKnown RBP1.03□□□□□ -2.24
SRL1YOR247W SHU1P38751 150 aa1.02□□□□□ -2.25
SRL1YOR247W PDR11P40550 1411 aa1.02□□□□□ -2.25
SRL1YOR247W YDR010CQ12426 110 aa1.02□□□□□ -2.25
SRL1YOR247W YCR095W-AQ3E787 52 aa1.02□□□□□ -2.25
SRL1YOR247W KSH1Q8TGJ3 72 aa1.02□□□□□ -2.25
SRL1YOR247W SWR1Q05471 1514 aa1.01□□□□□ -2.25
SRL1YOR247W YLR255CO13574 117 aa1.01□□□□□ -2.25
SRL1YOR247W YDR210WQ03482 75 aa1.01□□□□□ -2.25
SRL1YOR247W ZEO1Q08245 113 aa1.01□□□□□ -2.25
SRL1YOR247W YPL225WQ08971 146 aaKnown RBP1.01□□□□□ -2.25
SRL1YOR247W SEC7P11075 2009 aaKnown RBP1.01□□□□□ -2.25
SRL1YOR247W TOP2P06786 1428 aaKnown RBP1□□□□□ -2.25
SRL1YOR247W AUA1P32450 94 aa1□□□□□ -2.25
SRL1YOR247W YHL005CP38752 130 aa1□□□□□ -2.25
SRL1YOR247W MPC2P38857 129 aa1□□□□□ -2.25
SRL1YOR247W GCV3P39726 170 aaPredicted RBP1□□□□□ -2.25
SRL1YOR247W SNA2P56508 79 aa1□□□□□ -2.25
SRL1YOR247W YRF1-6P53819 1859 aa1□□□□□ -2.25
SRL1YOR247W MRP17P28778 131 aa0.99□□□□□ -2.25
SRL1YOR247W YHR173CP38864 112 aa0.99□□□□□ -2.25
SRL1YOR247W RSM19P53733 91 aaPredicted RBP0.99□□□□□ -2.25
SRL1YOR247W REV3P14284 1504 aa0.99□□□□□ -2.25
SRL1YOR247W SRB8P25648 1427 aa0.98□□□□□ -2.25
SRL1YOR247W CAT8P39113 1433 aa0.98□□□□□ -2.25
SRL1YOR247W ROX3P25046 220 aa0.98□□□□□ -2.25
SRL1YOR247W EMC5P40540 141 aa0.98□□□□□ -2.25
SRL1YOR247W PAU5P43575 122 aa0.98□□□□□ -2.25
SRL1YOR247W TCB3Q03640 1545 aaKnown RBP0.98□□□□□ -2.25
SRL1YOR247W BUD4P47136 1447 aa0.98□□□□□ -2.25
SRL1YOR247W BRR2P32639 2163 aaKnown RBP0.96□□□□□ -2.26
SRL1YOR247W MRX7P53869 86 aa0.96□□□□□ -2.26
SRL1YOR247W YOR289WQ12012 251 aaPredicted RBP0.96□□□□□ -2.26
SRL1YOR247W TY1B-DR4Q07793 1604 aa0.96□□□□□ -2.26
SRL1YOR247W PRP8P33334 2413 aaKnown RBP0.96□□□□□ -2.26
SRL1YOR247W URB1P34241 1764 aaKnown RBP0.96□□□□□ -2.26
SRL1YOR247W TY4B-HP0C2J7 1802 aa0.95□□□□□ -2.26
SRL1YOR247W HMRA1P0CY11 126 aa0.95□□□□□ -2.26
SRL1YOR247W ICY1Q04329 127 aa0.95□□□□□ -2.26
SRL1YOR247W YBR292CP38357 123 aa0.94□□□□□ -2.26
SRL1YOR247W BPT1P14772 1559 aa0.94□□□□□ -2.26
SRL1YOR247W THO2P53552 1597 aaKnown RBP0.93□□□□□ -2.26
SRL1YOR247W PAU6P0CE90 120 aa0.93□□□□□ -2.26
SRL1YOR247W PAU18P0CE91 120 aa0.93□□□□□ -2.26
SRL1YOR247W AIM19P40502 157 aa0.93□□□□□ -2.26
SRL1YOR247W BNI1P41832 1953 aa0.92□□□□□ -2.26
SRL1YOR247W PEP1P32319 1579 aa0.92□□□□□ -2.26
SRL1YOR247W MRPL38P35996 138 aaPredicted RBP0.92□□□□□ -2.26
SRL1YOR247W MSL1P40567 111 aaPredicted RBP0.92□□□□□ -2.26
SRL1YOR247W PAU20Q08322 120 aa0.92□□□□□ -2.26
SRL1YOR247W RSF2P46974 1380 aa0.92□□□□□ -2.26
SRL1YOR247W LTE1P07866 1435 aa0.91□□□□□ -2.26
SRL1YOR247W SSN2P38931 1420 aa0.91□□□□□ -2.26
SRL1YOR247W YBL071CP38185 102 aa0.91□□□□□ -2.26
SRL1YOR247W RPS11AP0CX47 156 aaKnown RBP0.9□□□□□ -2.27
SRL1YOR247W RPS11BP0CX48 156 aaKnown RBP0.9□□□□□ -2.27
SRL1YOR247W RPS29BP41058 56 aaKnown RBP0.9□□□□□ -2.27
SRL1YOR247W YOL164W-AQ3E7A5 60 aa0.9□□□□□ -2.27
SRL1YOR247W YNR034W-AQ3E841 98 aa0.9□□□□□ -2.27
SRL1YOR247W BLM10P43583 2143 aa0.89□□□□□ -2.27
SRL1YOR247W DNF1P32660 1571 aa0.89□□□□□ -2.27
SRL1YOR247W SSK2P53599 1579 aa0.89□□□□□ -2.27
SRL1YOR247W IRC20Q06554 1556 aa0.89□□□□□ -2.27
SRL1YOR247W SPT6P23615 1451 aaKnown RBP0.89□□□□□ -2.27
SRL1YOR247W PAU1P0CE88 120 aa0.89□□□□□ -2.27
SRL1YOR247W PAU14P0CE89 120 aa0.89□□□□□ -2.27
SRL1YOR247W PAU8P0CE92 120 aa0.89□□□□□ -2.27
SRL1YOR247W PAU11P0CE93 120 aa0.89□□□□□ -2.27
SRL1YOR247W PAU13P38725 120 aa0.89□□□□□ -2.27
SRL1YOR247W PAU10Q03050 120 aa0.89□□□□□ -2.27
SRL1YOR247W PAU9Q3E770 120 aa0.89□□□□□ -2.27
SRL1YOR247W SUS1Q6WNK7 96 aa0.89□□□□□ -2.27
SRL1YOR247W POL2P21951 2222 aaKnown RBP0.89□□□□□ -2.27
SRL1YOR247W YCF1P39109 1515 aaKnown RBP0.89□□□□□ -2.27
SRL1YOR247W SNU13P39990 126 aaKnown RBP0.88□□□□□ -2.27
SRL1YOR247W NHP10Q03435 203 aa0.88□□□□□ -2.27
SRL1YOR247W RPO31P04051 1460 aa0.87□□□□□ -2.27
SRL1YOR247W RSM18P40033 138 aa0.87□□□□□ -2.27
SRL1YOR247W PAU4P53427 120 aa0.87□□□□□ -2.27
SRL1YOR247W RRT15Q3E811 62 aa0.87□□□□□ -2.27
SRL1YOR247W CDC25P04821 1589 aa0.87□□□□□ -2.27
SRL1YOR247W HIR3P47171 1648 aa0.86□□□□□ -2.27
SRL1YOR247W ESC1Q03661 1658 aaKnown RBP0.86□□□□□ -2.27
SRL1YOR247W NTE1Q04958 1679 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms