RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C YDR034C-AP0C289 58 aa1.97□□□□□ -2.09
ATG3YNR007C SRB6P32570 121 aa1.97□□□□□ -2.09
ATG3YNR007C RPL14AP36105 138 aaKnown RBP1.97□□□□□ -2.09
ATG3YNR007C YBL081WP38180 368 aaKnown RBP1.97□□□□□ -2.09
ATG3YNR007C RPL14BP38754 138 aaKnown RBP1.97□□□□□ -2.09
ATG3YNR007C SEC72P39742 193 aaKnown RBP1.97□□□□□ -2.09
ATG3YNR007C UBC12P52491 188 aa1.97□□□□□ -2.09
ATG3YNR007C YGL088WP53151 121 aa1.97□□□□□ -2.09
ATG3YNR007C LCL1Q02786 101 aa1.97□□□□□ -2.09
ATG3YNR007C ENV10Q99382 181 aa1.97□□□□□ -2.09
ATG3YNR007C UBC5P15732 148 aa1.96□□□□□ -2.1
ATG3YNR007C RPF1P38805 295 aaKnown RBP1.96□□□□□ -2.1
ATG3YNR007C ARC15P40518 154 aaRIP-Chip data1.96□□□□□ -2.1not detected
ATG3YNR007C PHS1P40857 217 aa1.96□□□□□ -2.1
ATG3YNR007C THG1P53215 237 aaKnown RBP1.96□□□□□ -2.1
ATG3YNR007C YGR025WP53216 100 aa1.96□□□□□ -2.1
ATG3YNR007C GPI19Q04082 140 aa1.96□□□□□ -2.1
ATG3YNR007C YGL194C-AQ2V2P6 80 aa1.96□□□□□ -2.1
ATG3YNR007C YGL041C-BQ3E750 60 aa1.96□□□□□ -2.1
ATG3YNR007C SRP21P32342 167 aa1.95□□□□□ -2.1
ATG3YNR007C QRI5P32344 111 aa1.95□□□□□ -2.1
ATG3YNR007C YKR070WP36151 352 aaKnown RBP1.95□□□□□ -2.1
ATG3YNR007C RPB11P38902 120 aa1.95□□□□□ -2.1
ATG3YNR007C YER076CP40049 302 aa1.95□□□□□ -2.1
ATG3YNR007C POG1P40473 351 aa1.95□□□□□ -2.1
ATG3YNR007C SNN1P48232 102 aa1.95□□□□□ -2.1
ATG3YNR007C YDR029WQ12111 104 aa1.95□□□□□ -2.1
ATG3YNR007C YMR175W-AQ3E766 64 aa1.95□□□□□ -2.1
ATG3YNR007C HTL1Q9URQ5 78 aa1.95□□□□□ -2.1
ATG3YNR007C YCR023CP25351 611 aa1.94□□□□□ -2.1
ATG3YNR007C YMR141CP40211 102 aa1.94□□□□□ -2.1
ATG3YNR007C DAN1P47178 298 aa1.94□□□□□ -2.1
ATG3YNR007C YMR320WQ04897 101 aa1.94□□□□□ -2.1
ATG3YNR007C FCF1Q05498 189 aaPredicted RBP1.94□□□□□ -2.1
ATG3YNR007C NAT3Q06504 195 aa1.94□□□□□ -2.1
ATG3YNR007C LCL2Q08045 131 aa1.94□□□□□ -2.1
ATG3YNR007C SNU23Q12368 194 aaPredicted RBP1.94□□□□□ -2.1
ATG3YNR007C YBL112CQ3E7Y4 105 aa1.94□□□□□ -2.1
ATG3YNR007C YLL066W-BQ8TGJ7 56 aa1.94□□□□□ -2.1
ATG3YNR007C YCL001W-BQ96VH2 84 aa1.94□□□□□ -2.1
ATG3YNR007C ADH3P07246 375 aaKnown RBP1.93□□□□□ -2.1
ATG3YNR007C NHP6AP11632 93 aaKnown RBP1.93□□□□□ -2.1
ATG3YNR007C YKR032WP36127 104 aa1.93□□□□□ -2.1
ATG3YNR007C YIL163CP40448 117 aa1.93□□□□□ -2.1
ATG3YNR007C CIN5P40917 295 aa1.93□□□□□ -2.1
ATG3YNR007C DCV1P43595 202 aa1.93□□□□□ -2.1
ATG3YNR007C ERV14P53173 138 aa1.93□□□□□ -2.1
ATG3YNR007C SNA2P56508 79 aa1.93□□□□□ -2.1
ATG3YNR007C PKR1Q03880 122 aaKnown RBP1.93□□□□□ -2.1
ATG3YNR007C YDL241WQ07738 123 aa1.93□□□□□ -2.1
ATG3YNR007C ZEO1Q08245 113 aa1.93□□□□□ -2.1
ATG3YNR007C KRE1P17260 313 aa1.92□□□□□ -2.1
ATG3YNR007C PGD1P40356 397 aa1.92□□□□□ -2.1
ATG3YNR007C RPC10P40422 70 aa1.92□□□□□ -2.1
ATG3YNR007C YFL019CP43576 117 aa1.92□□□□□ -2.1
ATG3YNR007C YOR008C-AQ3E7B9 74 aa1.92□□□□□ -2.1
ATG3YNR007C RPS22BQ3E7Y3 130 aaKnown RBP1.92□□□□□ -2.1
ATG3YNR007C YGL010WP25338 174 aa1.91□□□□□ -2.1
ATG3YNR007C FZF1P32805 299 aa1.91□□□□□ -2.1
ATG3YNR007C SRP14P38985 146 aa1.91□□□□□ -2.1
ATG3YNR007C VTC1P40046 129 aaRIP-Chip data1.91□□□□□ -2.1not detected
ATG3YNR007C YLR118CQ12354 227 aa1.91□□□□□ -2.1
ATG3YNR007C WIP1Q2V2P8 89 aa1.91□□□□□ -2.1
ATG3YNR007C YNR034W-AQ3E841 98 aa1.91□□□□□ -2.1
ATG3YNR007C PFY1P07274 126 aa1.9□□□□□ -2.11
ATG3YNR007C APS1P35181 156 aa1.9□□□□□ -2.11
ATG3YNR007C YBR209WP38311 105 aa1.9□□□□□ -2.11
ATG3YNR007C HUA1P40325 198 aa1.9□□□□□ -2.11
ATG3YNR007C PAU15P40585 124 aa1.9□□□□□ -2.11
ATG3YNR007C TOS6P48560 102 aa1.9□□□□□ -2.11
ATG3YNR007C YBL008W-AQ3E821 79 aa1.9□□□□□ -2.11
ATG3YNR007C ECM12O13529 151 aa1.89□□□□□ -2.11
ATG3YNR007C RPL26AP05743 127 aaKnown RBP1.89□□□□□ -2.11
ATG3YNR007C YJL197C-AP0C5P0 93 aa1.89□□□□□ -2.11
ATG3YNR007C HAP3P13434 144 aa1.89□□□□□ -2.11
ATG3YNR007C CNB1P25296 175 aa1.89□□□□□ -2.11
ATG3YNR007C AIM19P40502 157 aa1.89□□□□□ -2.11
ATG3YNR007C MMS2P53152 137 aa1.89□□□□□ -2.11
ATG3YNR007C RPL26BP53221 127 aaKnown RBP1.89□□□□□ -2.11
ATG3YNR007C YOR268CQ08734 132 aa1.89□□□□□ -2.11
ATG3YNR007C VMA9Q3E7B6 73 aa1.89□□□□□ -2.11
ATG3YNR007C RRT15Q3E811 62 aa1.89□□□□□ -2.11
ATG3YNR007C YLR307C-AQ3E825 87 aa1.89□□□□□ -2.11
ATG3YNR007C YER039C-AP0CD97 72 aa1.88□□□□□ -2.11
ATG3YNR007C ABF2Q02486 183 aa1.88□□□□□ -2.11
ATG3YNR007C MGR2Q02889 113 aa1.88□□□□□ -2.11
ATG3YNR007C QCR8P08525 94 aa1.87□□□□□ -2.11
ATG3YNR007C AQY2P0CD90 149 aa1.87□□□□□ -2.11
ATG3YNR007C PAU19P0CE85 124 aa1.87□□□□□ -2.11
ATG3YNR007C PAU21P0CE86 164 aa1.87□□□□□ -2.11
ATG3YNR007C PAU22P0CE87 164 aa1.87□□□□□ -2.11
ATG3YNR007C HMRA2P0CY13 119 aa1.87□□□□□ -2.11
ATG3YNR007C HYP2P23301 157 aaKnown RBP1.87□□□□□ -2.11
ATG3YNR007C PAU3P25610 124 aa1.87□□□□□ -2.11
ATG3YNR007C YAL064WP39711 94 aa1.87□□□□□ -2.11
ATG3YNR007C YJR146WP47174 117 aa1.87□□□□□ -2.11
ATG3YNR007C YLR194CQ05777 254 aa1.87□□□□□ -2.11
ATG3YNR007C FSF1Q12029 327 aaKnown RBP1.87□□□□□ -2.11
ATG3YNR007C POR1P04840 283 aaKnown RBP1.86□□□□□ -2.11
ATG3YNR007C RPL27BP0C2H7 136 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms