RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YPT53P36019 220 aa6.63□□□□□ -1.35
RPD3YNL330C YER135CP40082 130 aa6.63□□□□□ -1.35
RPD3YNL330C AIM34Q03673 198 aa6.63□□□□□ -1.35
RPD3YNL330C MSA1Q08471 629 aa6.63□□□□□ -1.35
RPD3YNL330C SRL1Q08673 210 aa6.63□□□□□ -1.35
RPD3YNL330C Q0255P03881 472 aa6.62□□□□□ -1.35
RPD3YNL330C RPS8AP0CX39 200 aaKnown RBP6.62□□□□□ -1.35
RPD3YNL330C RPS8BP0CX40 200 aaKnown RBP6.62□□□□□ -1.35
RPD3YNL330C RPL16BP26785 198 aaKnown RBP6.62□□□□□ -1.35
RPD3YNL330C CAX4P53223 239 aa6.62□□□□□ -1.35
RPD3YNL330C YLR194CQ05777 254 aa6.62□□□□□ -1.35
RPD3YNL330C Q0297Q9ZZV8 51 aa6.62□□□□□ -1.35
RPD3YNL330C CDC43P18898 376 aa6.61□□□□□ -1.35
RPD3YNL330C DUT1P33317 147 aa6.61□□□□□ -1.35
RPD3YNL330C YFR057WP43625 151 aa6.61□□□□□ -1.35
RPD3YNL330C YJR146WP47174 117 aa6.61□□□□□ -1.35
RPD3YNL330C ATP15P21306 62 aa6.6□□□□□ -1.35
RPD3YNL330C NHP2P32495 156 aaPredicted RBP6.6□□□□□ -1.35
RPD3YNL330C YMR244WQ04018 355 aa6.59□□□□□ -1.35
RPD3YNL330C LSM6Q06406 86 aaKnown RBP6.59□□□□□ -1.35
RPD3YNL330C YLR042CQ07990 161 aa6.59□□□□□ -1.35
RPD3YNL330C RPL16AP26784 199 aaKnown RBP6.58□□□□□ -1.36
RPD3YNL330C MIG3P39943 394 aa6.58□□□□□ -1.36
RPD3YNL330C YER085CP40058 173 aa6.58□□□□□ -1.36
RPD3YNL330C MRPS8Q03799 155 aa6.58□□□□□ -1.36
RPD3YNL330C MRPL23Q12487 163 aaPredicted RBP6.58□□□□□ -1.36
RPD3YNL330C TRP1P00912 224 aa6.57□□□□□ -1.36
RPD3YNL330C VTC1P40046 129 aaRIP-Chip data6.57□□□□□ -1.36not detected
RPD3YNL330C PEX17P40155 199 aa6.57□□□□□ -1.36
RPD3YNL330C VHS2P40463 436 aa6.57□□□□□ -1.36
RPD3YNL330C SIM1P40472 476 aa6.57□□□□□ -1.36
RPD3YNL330C YCH1P42937 148 aa6.56□□□□□ -1.36
RPD3YNL330C URA2P07259 2214 aaKnown RBP6.56□□□□□ -1.36
RPD3YNL330C RPL18AP0CX49 186 aaKnown RBP6.54□□□□□ -1.36
RPD3YNL330C RPL18BP0CX50 186 aaKnown RBP6.54□□□□□ -1.36
RPD3YNL330C RRT13P40042 185 aa6.54□□□□□ -1.36
RPD3YNL330C HPA2Q06592 156 aa6.54□□□□□ -1.36
RPD3YNL330C TRA1P38811 3744 aa6.54□□□□□ -1.36
RPD3YNL330C RPL28P02406 149 aaKnown RBP6.53□□□□□ -1.36
RPD3YNL330C ATX1P38636 73 aa6.53□□□□□ -1.36
RPD3YNL330C OST2P46964 130 aa6.53□□□□□ -1.36
RPD3YNL330C YER145C-AA0A023PYF4 145 aa6.52□□□□□ -1.37
RPD3YNL330C UGX2P32772 223 aa6.52□□□□□ -1.37
RPD3YNL330C ALG13P53178 202 aa6.52□□□□□ -1.37
RPD3YNL330C RPB9P27999 122 aa6.51□□□□□ -1.37
RPD3YNL330C YCR041WP37265 110 aa6.51□□□□□ -1.37
RPD3YNL330C YBR209WP38311 105 aa6.51□□□□□ -1.37
RPD3YNL330C SHU1P38751 150 aa6.51□□□□□ -1.37
RPD3YNL330C MRPS12P53732 153 aa6.51□□□□□ -1.37
RPD3YNL330C TAR1Q8TGM6 124 aa6.51□□□□□ -1.37
RPD3YNL330C YCL021W-AQ96VH3 125 aa6.51□□□□□ -1.37
RPD3YNL330C PRP8P33334 2413 aaKnown RBP6.51□□□□□ -1.37
RPD3YNL330C QCR8P08525 94 aa6.5□□□□□ -1.37
RPD3YNL330C YFR035CP43608 114 aa6.5□□□□□ -1.37
RPD3YNL330C RPL2AP0CX45 254 aaKnown RBP6.5□□□□□ -1.37
RPD3YNL330C RPL2BP0CX46 254 aaKnown RBP6.5□□□□□ -1.37
RPD3YNL330C RPS11AP0CX47 156 aaKnown RBP6.5□□□□□ -1.37
RPD3YNL330C RPS11BP0CX48 156 aaKnown RBP6.5□□□□□ -1.37
RPD3YNL330C YEL008WP40001 126 aa6.5□□□□□ -1.37
RPD3YNL330C PMP3P87284 55 aa6.5□□□□□ -1.37
RPD3YNL330C RPL15AP05748 204 aaKnown RBP6.49□□□□□ -1.37
RPD3YNL330C MID2P36027 376 aa6.49□□□□□ -1.37
RPD3YNL330C YGL088WP53151 121 aa6.49□□□□□ -1.37
RPD3YNL330C INO4P13902 151 aa6.48□□□□□ -1.37
RPD3YNL330C YHR130CP38834 111 aa6.48□□□□□ -1.37
RPD3YNL330C FIP1P45976 327 aa6.48□□□□□ -1.37
RPD3YNL330C YNL190WP53872 204 aa6.48□□□□□ -1.37
RPD3YNL330C YIL059CP40520 121 aa6.47□□□□□ -1.37
RPD3YNL330C ISD11Q6Q560 94 aa6.47□□□□□ -1.37
RPD3YNL330C UBC5P15732 148 aa6.46□□□□□ -1.38
RPD3YNL330C MLF3P32047 452 aa6.46□□□□□ -1.38
RPD3YNL330C RPA12P32529 125 aaKnown RBP6.46□□□□□ -1.38
RPD3YNL330C NRG2P38082 220 aa6.46□□□□□ -1.38
RPD3YNL330C MPC2P38857 129 aa6.46□□□□□ -1.38
RPD3YNL330C RPP2AP05319 106 aaKnown RBP6.45□□□□□ -1.38
RPD3YNL330C RPL43AP0CX25 92 aaKnown RBP6.45□□□□□ -1.38
RPD3YNL330C RPL43BP0CX26 92 aa6.45□□□□□ -1.38
RPD3YNL330C COX10P21592 462 aa6.45□□□□□ -1.38
RPD3YNL330C YAR029WP39549 74 aa6.45□□□□□ -1.38
RPD3YNL330C YHR212W-AP0CX91 67 aa6.44□□□□□ -1.38
RPD3YNL330C EOS1P53938 366 aa6.44□□□□□ -1.38
RPD3YNL330C PPT2Q12036 173 aa6.44□□□□□ -1.38
RPD3YNL330C YBR126W-AQ8TGU7 68 aa6.44□□□□□ -1.38
RPD3YNL330C YIA6P40556 373 aa6.43□□□□□ -1.38
RPD3YNL330C YFL065CP43539 102 aa6.43□□□□□ -1.38
RPD3YNL330C YPS5P53057 165 aa6.43□□□□□ -1.38
RPD3YNL330C YPR203WQ08994 102 aa6.43□□□□□ -1.38
RPD3YNL330C YCR085WP25650 117 aa6.42□□□□□ -1.38
RPD3YNL330C KRE9P39005 276 aa6.42□□□□□ -1.38
RPD3YNL330C ARC15P40518 154 aaRIP-Chip data6.42□□□□□ -1.38not detected
RPD3YNL330C YCR075W-AQ3E830 75 aa6.42□□□□□ -1.38
RPD3YNL330C MEC1P38111 2368 aa6.41□□□□□ -1.38
RPD3YNL330C DSE2P38844 325 aa6.41□□□□□ -1.38
RPD3YNL330C ABF2Q02486 183 aa6.41□□□□□ -1.38
RPD3YNL330C TEL1P38110 2787 aa6.4□□□□□ -1.38
RPD3YNL330C YBR144CP34215 104 aa6.39□□□□□ -1.39
RPD3YNL330C HUR1P45820 110 aa6.39□□□□□ -1.39
RPD3YNL330C YMR295CQ03559 197 aa6.39□□□□□ -1.39
RPD3YNL330C COX14P39103 70 aa6.38□□□□□ -1.39
RPD3YNL330C CWP2P43497 92 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms