RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C DAD1Q12248 94 aa-0.51□□□□□ -2.49
NIP1YMR309C YPL038W-AQ3E7B4 63 aa-0.51□□□□□ -2.49
NIP1YMR309C YOR376W-AQ3E805 51 aa-0.51□□□□□ -2.49
NIP1YMR309C BPT1P14772 1559 aa-0.51□□□□□ -2.49
NIP1YMR309C YLR419WQ06698 1435 aaKnown RBP-0.51□□□□□ -2.49
NIP1YMR309C TY1B-BRQ12193 1756 aa-0.51□□□□□ -2.49
NIP1YMR309C RPC10P40422 70 aa-0.52□□□□□ -2.49
NIP1YMR309C GTT1P40582 234 aa-0.52□□□□□ -2.49
NIP1YMR309C SAE3P89114 91 aa-0.52□□□□□ -2.49
NIP1YMR309C YCR108CQ3E819 63 aa-0.52□□□□□ -2.49
NIP1YMR309C PAU24P38155 120 aa-0.52□□□□□ -2.49
NIP1YMR309C PAM16P42949 149 aa-0.52□□□□□ -2.49
NIP1YMR309C YGR025WP53216 100 aa-0.52□□□□□ -2.49
NIP1YMR309C AIM11P87275 137 aa-0.52□□□□□ -2.49
NIP1YMR309C RPO21P04050 1733 aaKnown RBP-0.52□□□□□ -2.49
NIP1YMR309C YCR099CP25657 155 aa-0.53□□□□□ -2.49
NIP1YMR309C YHR138CP38841 114 aaPredicted RBP-0.53□□□□□ -2.49
NIP1YMR309C TDA2P40045 126 aa-0.53□□□□□ -2.49
NIP1YMR309C CSN9Q03981 162 aa-0.53□□□□□ -2.49
NIP1YMR309C YIL134C-AQ45U18 67 aa-0.53□□□□□ -2.49
NIP1YMR309C TOR2P32600 2474 aaKnown RBP-0.53□□□□□ -2.49
NIP1YMR309C PAU2P32612 120 aa-0.53□□□□□ -2.49
NIP1YMR309C RPL38P49167 78 aaKnown RBP-0.53□□□□□ -2.49
NIP1YMR309C MRX7P53869 86 aa-0.53□□□□□ -2.49
NIP1YMR309C ICY1Q04329 127 aa-0.53□□□□□ -2.49
NIP1YMR309C SRB8P25648 1427 aa-0.54□□□□□ -2.5
NIP1YMR309C RSM18P40033 138 aa-0.54□□□□□ -2.5
NIP1YMR309C SPC24Q04477 213 aa-0.54□□□□□ -2.5
NIP1YMR309C PAU19P0CE85 124 aa-0.54□□□□□ -2.5
NIP1YMR309C PAU3P25610 124 aa-0.54□□□□□ -2.5
NIP1YMR309C PDX3P38075 228 aaKnown RBP-0.54□□□□□ -2.5
NIP1YMR309C YGL204CP53089 101 aa-0.54□□□□□ -2.5
NIP1YMR309C YHR050W-AQ05451 56 aa-0.54□□□□□ -2.5
NIP1YMR309C SMD2Q06217 110 aaKnown RBP-0.55□□□□□ -2.5
NIP1YMR309C YLR361C-AQ3E795 98 aa-0.55□□□□□ -2.5
NIP1YMR309C TY1B-PR2P0C2J0 1756 aa-0.55□□□□□ -2.5
NIP1YMR309C GCN1P33892 2672 aaKnown RBP-0.55□□□□□ -2.5
NIP1YMR309C YJR107C-AP0CT86 78 aa-0.55□□□□□ -2.5
NIP1YMR309C YDR381C-AQ3E6R5 114 aa-0.55□□□□□ -2.5
NIP1YMR309C DNF3Q12674 1656 aa-0.55□□□□□ -2.5
NIP1YMR309C BUD4P47136 1447 aa-0.56□□□□□ -2.5
NIP1YMR309C MRP17P28778 131 aa-0.56□□□□□ -2.5
NIP1YMR309C YDR246W-AQ3E763 66 aa-0.56□□□□□ -2.5
NIP1YMR309C YLR365WQ7LIF2 110 aa-0.56□□□□□ -2.5
NIP1YMR309C CUP1-1P0CX80 61 aa-0.56□□□□□ -2.5
NIP1YMR309C CUP1-2P0CX81 61 aa-0.56□□□□□ -2.5
NIP1YMR309C PAU15P40585 124 aa-0.56□□□□□ -2.5
NIP1YMR309C HUR1P45820 110 aa-0.56□□□□□ -2.5
NIP1YMR309C TIM8P57744 87 aa-0.56□□□□□ -2.5
NIP1YMR309C SEN1Q00416 2231 aaKnown RBP-0.56□□□□□ -2.5
NIP1YMR309C SWC7Q06707 132 aa-0.57□□□□□ -2.5
NIP1YMR309C YPR117WQ06116 2489 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-DR6P0C2I3 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-LR2P0C2I5 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-JR2P47100 1755 aaKnown RBP-0.57□□□□□ -2.5
NIP1YMR309C TY1B-MR1Q04214 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-MR2Q04670 1755 aaKnown RBP-0.57□□□□□ -2.5
NIP1YMR309C TY1B-NL1Q12112 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-GR1Q12141 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-GR3Q12316 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C TY1B-PLQ12414 1755 aaKnown RBP-0.57□□□□□ -2.5
NIP1YMR309C TY1B-ORQ92393 1755 aa-0.57□□□□□ -2.5
NIP1YMR309C SRB6P32570 121 aa-0.57□□□□□ -2.5
NIP1YMR309C PAU16P35994 123 aa-0.57□□□□□ -2.5
NIP1YMR309C RPB11P38902 120 aa-0.57□□□□□ -2.5
NIP1YMR309C VMA21P41806 77 aa-0.57□□□□□ -2.5
NIP1YMR309C NKP2Q06162 153 aa-0.57□□□□□ -2.5
NIP1YMR309C YLR118CQ12354 227 aa-0.57□□□□□ -2.5
NIP1YMR309C COX7P10174 60 aa-0.58□□□□□ -2.5
NIP1YMR309C AIM19P40502 157 aa-0.58□□□□□ -2.5
NIP1YMR309C MIX14Q04341 121 aa-0.58□□□□□ -2.5
NIP1YMR309C PAU20Q08322 120 aa-0.58□□□□□ -2.5
NIP1YMR309C UTP20P35194 2493 aaKnown RBP-0.58□□□□□ -2.5
NIP1YMR309C TLG1Q03322 224 aa-0.58□□□□□ -2.5
NIP1YMR309C SNA2P56508 79 aa-0.59□□□□□ -2.5
NIP1YMR309C YIR021W-AQ3E739 70 aa-0.59□□□□□ -2.5
NIP1YMR309C YCR095W-AQ3E787 52 aa-0.59□□□□□ -2.5
NIP1YMR309C MRP49P32388 137 aa-0.59□□□□□ -2.5
NIP1YMR309C YAR029WP39549 74 aa-0.59□□□□□ -2.5
NIP1YMR309C YNR034W-AQ3E841 98 aa-0.59□□□□□ -2.5
NIP1YMR309C TOR1P35169 2470 aa-0.6□□□□□ -2.51
NIP1YMR309C YBR090CP38253 122 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-DR5P0C2I2 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.6□□□□□ -2.51
NIP1YMR309C TY1B-JR1P47098 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-ML2Q03434 1755 aaKnown RBP-0.6□□□□□ -2.51
NIP1YMR309C TY1B-ER1Q03612 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-DR1Q03855 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-ML1Q04711 1755 aaKnown RBP-0.6□□□□□ -2.51
NIP1YMR309C TY1B-GR2Q12269 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-OLQ12273 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C TY1B-DR3Q99231 1755 aa-0.6□□□□□ -2.51
NIP1YMR309C PAU6P0CE90 120 aa-0.6□□□□□ -2.51
NIP1YMR309C PAU18P0CE91 120 aa-0.6□□□□□ -2.51
NIP1YMR309C BUD23P25627 275 aaPredicted RBP-0.6□□□□□ -2.51
NIP1YMR309C TY1B-ER2Q03619 1755 aa-0.61□□□□□ -2.51
NIP1YMR309C TY1B-LR1Q12088 1755 aaKnown RBP-0.61□□□□□ -2.51
NIP1YMR309C VMA7P39111 118 aa-0.61□□□□□ -2.51
NIP1YMR309C APS2Q00381 147 aa-0.61□□□□□ -2.51
NIP1YMR309C DYN2Q02647 92 aa-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms