RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C MIX14Q04341 121 aa0.46□□□□□ -2.34
RKR1YMR247C YCL012CQ8J0M4 134 aa0.46□□□□□ -2.34
RKR1YMR247C CYR1P08678 2026 aaKnown RBP0.46□□□□□ -2.34
RKR1YMR247C MRP49P32388 137 aa0.46□□□□□ -2.34
RKR1YMR247C SRB6P32570 121 aa0.46□□□□□ -2.34
RKR1YMR247C RCF2P53721 224 aa0.46□□□□□ -2.34
RKR1YMR247C YKL023C-AQ2V2P3 75 aa0.46□□□□□ -2.34
RKR1YMR247C UBC4P15731 148 aa0.46□□□□□ -2.34
RKR1YMR247C SUA7P29055 345 aaPredicted RBP0.46□□□□□ -2.34
RKR1YMR247C YEA6P39953 335 aa0.46□□□□□ -2.34
RKR1YMR247C YMR141CP40211 102 aa0.46□□□□□ -2.34
RKR1YMR247C CSN9Q03981 162 aa0.46□□□□□ -2.34
RKR1YMR247C YLR296WQ05898 108 aa0.46□□□□□ -2.34
RKR1YMR247C MRPL11P36521 249 aaPredicted RBP0.45□□□□□ -2.34
RKR1YMR247C RPS20P38701 121 aaKnown RBP0.45□□□□□ -2.34
RKR1YMR247C HHY1P39982 102 aa0.45□□□□□ -2.34
RKR1YMR247C ELC1Q03071 99 aa0.45□□□□□ -2.34
RKR1YMR247C RPL33AP05744 107 aaKnown RBP0.45□□□□□ -2.34
RKR1YMR247C YBR027CP38220 110 aa0.45□□□□□ -2.34
RKR1YMR247C PRS3P38689 320 aaKnown RBP0.45□□□□□ -2.34
RKR1YMR247C HUA1P40325 198 aa0.45□□□□□ -2.34
RKR1YMR247C LSM1P47017 172 aaKnown RBP0.45□□□□□ -2.34
RKR1YMR247C RPL37BP51402 88 aaKnown RBP0.45□□□□□ -2.34
RKR1YMR247C AIM11P87275 137 aa0.45□□□□□ -2.34
RKR1YMR247C MRPL31P14063 131 aaPredicted RBP0.45□□□□□ -2.34
RKR1YMR247C RSM19P53733 91 aaPredicted RBP0.45□□□□□ -2.34
RKR1YMR247C MGR2Q02889 113 aa0.45□□□□□ -2.34
RKR1YMR247C SPC3Q12133 184 aa0.45□□□□□ -2.34
RKR1YMR247C POC4Q12245 148 aaPredicted RBP0.45□□□□□ -2.34
RKR1YMR247C YEL028WP39989 153 aa0.44□□□□□ -2.34
RKR1YMR247C RGI1P40043 161 aaPredicted RBP0.44□□□□□ -2.34
RKR1YMR247C YFR035CP43608 114 aa0.44□□□□□ -2.34
RKR1YMR247C YPL067CQ02754 198 aa0.44□□□□□ -2.34
RKR1YMR247C CNL1Q06333 122 aa0.44□□□□□ -2.34
RKR1YMR247C YGL041C-BQ3E750 60 aa0.44□□□□□ -2.34
RKR1YMR247C YNL277W-AQ3E7Z0 62 aa0.44□□□□□ -2.34
RKR1YMR247C YKL068W-AQ3E826 78 aa0.44□□□□□ -2.34
RKR1YMR247C VPS13Q07878 3144 aa0.44□□□□□ -2.34
RKR1YMR247C ADK1P07170 222 aaKnown RBP0.44□□□□□ -2.34
RKR1YMR247C UBI4P0CG63 381 aaKnown RBP0.44□□□□□ -2.34
RKR1YMR247C YHR212W-AP0CX91 67 aa0.44□□□□□ -2.34
RKR1YMR247C DDR48P18899 430 aaKnown RBP0.44□□□□□ -2.34
RKR1YMR247C COF1Q03048 143 aaKnown RBP0.44□□□□□ -2.34
RKR1YMR247C YDR119W-AQ2V2P9 66 aa0.44□□□□□ -2.34
RKR1YMR247C AQY2P0CD90 149 aa0.44□□□□□ -2.34
RKR1YMR247C IPT1P38954 527 aa0.44□□□□□ -2.34
RKR1YMR247C SPI1P40092 148 aa0.44□□□□□ -2.34
RKR1YMR247C RPL37AP49166 88 aaKnown RBP0.44□□□□□ -2.34
RKR1YMR247C FIT2Q08906 153 aa0.44□□□□□ -2.34
RKR1YMR247C YOL013W-AP0C272 63 aaPredicted RBP0.44□□□□□ -2.34
RKR1YMR247C RPL43AP0CX25 92 aaKnown RBP0.44□□□□□ -2.34
RKR1YMR247C RPL43BP0CX26 92 aa0.44□□□□□ -2.34
RKR1YMR247C YEL014CP39999 101 aa0.44□□□□□ -2.34
RKR1YMR247C AIM19P40502 157 aa0.44□□□□□ -2.34
RKR1YMR247C FYV7Q12247 151 aa0.44□□□□□ -2.34
RKR1YMR247C YOR097CQ12274 175 aaPredicted RBP0.44□□□□□ -2.34
RKR1YMR247C ENV10Q99382 181 aa0.44□□□□□ -2.34
RKR1YMR247C CSH1P38287 376 aa0.43□□□□□ -2.34
RKR1YMR247C YFL051CP43552 160 aa0.43□□□□□ -2.34
RKR1YMR247C YMR122CQ03879 124 aa0.43□□□□□ -2.34
RKR1YMR247C RPL30P14120 105 aaKnown RBP0.43□□□□□ -2.34
RKR1YMR247C SLM6P38343 150 aa0.43□□□□□ -2.34
RKR1YMR247C HSK3P69852 69 aa0.43□□□□□ -2.34
RKR1YMR247C PST2Q12335 198 aaKnown RBP0.43□□□□□ -2.34
RKR1YMR247C EMP24P32803 203 aaKnown RBP0.43□□□□□ -2.34
RKR1YMR247C YEL008WP40001 126 aa0.43□□□□□ -2.34
RKR1YMR247C SED1Q01589 338 aa0.43□□□□□ -2.34
RKR1YMR247C PAU23Q07987 124 aa0.43□□□□□ -2.34
RKR1YMR247C PAU17Q12370 124 aa0.43□□□□□ -2.34
RKR1YMR247C DDP1Q99321 188 aaKnown RBP0.43□□□□□ -2.34
RKR1YMR247C YIR020CP40575 100 aa0.43□□□□□ -2.34
RKR1YMR247C SAE3P89114 91 aa0.43□□□□□ -2.34
RKR1YMR247C YPR153WQ06537 140 aa0.43□□□□□ -2.34
RKR1YMR247C YGR121W-AQ3E816 71 aa0.43□□□□□ -2.34
RKR1YMR247C YFR010W-AP0C5N0 62 aa0.42□□□□□ -2.34
RKR1YMR247C RPL14AP36105 138 aaKnown RBP0.42□□□□□ -2.34
RKR1YMR247C YBR032WP38223 100 aa0.42□□□□□ -2.34
RKR1YMR247C RPL14BP38754 138 aaKnown RBP0.42□□□□□ -2.34
RKR1YMR247C SNF11P38956 169 aa0.42□□□□□ -2.34
RKR1YMR247C PHS1P40857 217 aa0.42□□□□□ -2.34
RKR1YMR247C YNL122CP53921 115 aaPredicted RBP0.42□□□□□ -2.34
RKR1YMR247C KSH1Q8TGJ3 72 aa0.42□□□□□ -2.34
RKR1YMR247C CCW14O13547 238 aa0.42□□□□□ -2.34
RKR1YMR247C TDA2P40045 126 aa0.42□□□□□ -2.34
RKR1YMR247C PAU15P40585 124 aa0.42□□□□□ -2.34
RKR1YMR247C YCR075W-AQ3E830 75 aa0.42□□□□□ -2.34
RKR1YMR247C HYM1P32464 399 aa0.42□□□□□ -2.34
RKR1YMR247C VMA7P39111 118 aa0.42□□□□□ -2.34
RKR1YMR247C VMA21P41806 77 aa0.42□□□□□ -2.34
RKR1YMR247C GNA1P43577 159 aaPredicted RBP0.42□□□□□ -2.34
RKR1YMR247C RPS12P48589 143 aaKnown RBP0.42□□□□□ -2.34
RKR1YMR247C MIC27P50945 234 aa0.42□□□□□ -2.34
RKR1YMR247C GPI19Q04082 140 aa0.42□□□□□ -2.34
RKR1YMR247C YLR363W-AQ3E747 85 aa0.42□□□□□ -2.34
RKR1YMR247C YDR210WQ03482 75 aa0.41□□□□□ -2.34
RKR1YMR247C HUG1Q6Q5K6 68 aa0.41□□□□□ -2.34
RKR1YMR247C YCL042WP25572 119 aa0.41□□□□□ -2.34
RKR1YMR247C FYV5P25585 152 aa0.41□□□□□ -2.34
RKR1YMR247C SFT1P43682 97 aa0.41□□□□□ -2.34
RKR1YMR247C RPL22BP56628 122 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms