RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W VPS13Q07878 3144 aa1.49□□□□□ -2.17
ECM5YMR176W RPB7P34087 171 aa1.48□□□□□ -2.17
ECM5YMR176W BAT2P47176 376 aaKnown RBP1.48□□□□□ -2.17
ECM5YMR176W YDL180WQ12301 547 aa1.48□□□□□ -2.17
ECM5YMR176W MPD1Q12404 318 aaKnown RBP1.48□□□□□ -2.17
ECM5YMR176W YKL018C-AQ3E7A7 99 aa1.48□□□□□ -2.17
ECM5YMR176W YFL041W-AQ3E817 63 aa1.48□□□□□ -2.17
ECM5YMR176W YOL162WP0CF19 215 aa1.48□□□□□ -2.17
ECM5YMR176W TOM6P33448 61 aa1.48□□□□□ -2.17
ECM5YMR176W YMR082CQ04276 118 aa1.48□□□□□ -2.17
ECM5YMR176W YMR103CQ04436 120 aa1.48□□□□□ -2.17
ECM5YMR176W ELP6Q04868 273 aa1.48□□□□□ -2.17
ECM5YMR176W GRX8Q05926 109 aa1.48□□□□□ -2.17
ECM5YMR176W YOR097CQ12274 175 aaPredicted RBP1.48□□□□□ -2.17
ECM5YMR176W RPS22AP0C0W1 130 aaKnown RBP1.48□□□□□ -2.17
ECM5YMR176W YHR086W-AQ3E746 53 aa1.48□□□□□ -2.17
ECM5YMR176W TSC3Q3E790 80 aa1.48□□□□□ -2.17
ECM5YMR176W YER181CP40097 107 aa1.48□□□□□ -2.17
ECM5YMR176W YPL073CP40323 161 aa1.48□□□□□ -2.17
ECM5YMR176W RPL33BP41056 107 aaKnown RBP1.48□□□□□ -2.17
ECM5YMR176W KNH1P50112 268 aa1.48□□□□□ -2.17
ECM5YMR176W BUD25P85052 153 aa1.48□□□□□ -2.17
ECM5YMR176W DAD1Q12248 94 aa1.48□□□□□ -2.17
ECM5YMR176W ATP15P21306 62 aa1.47□□□□□ -2.17
ECM5YMR176W YKL044WP36092 106 aa1.47□□□□□ -2.17
ECM5YMR176W YHL042WP38729 150 aa1.47□□□□□ -2.17
ECM5YMR176W GPI2P46961 280 aa1.47□□□□□ -2.17
ECM5YMR176W POP3P53833 195 aaPredicted RBP1.47□□□□□ -2.17
ECM5YMR176W SVP26P38869 228 aa1.47□□□□□ -2.17
ECM5YMR176W SNF11P38956 169 aa1.47□□□□□ -2.17
ECM5YMR176W COX12Q01519 83 aa1.47□□□□□ -2.17
ECM5YMR176W YMR252CQ04814 134 aa1.47□□□□□ -2.17
ECM5YMR176W MDH2P22133 377 aa1.47□□□□□ -2.17
ECM5YMR176W YHL018WP38744 120 aaPredicted RBP1.47□□□□□ -2.17
ECM5YMR176W TDA4P47153 279 aa1.47□□□□□ -2.17
ECM5YMR176W VPS71Q03433 280 aa1.47□□□□□ -2.17
ECM5YMR176W MRS4P23500 304 aa1.46□□□□□ -2.18
ECM5YMR176W YHR022CP38763 256 aa1.46□□□□□ -2.18
ECM5YMR176W SFT1P43682 97 aa1.46□□□□□ -2.18
ECM5YMR176W SYM1Q06563 197 aa1.46□□□□□ -2.18
ECM5YMR176W SLH1P53327 1967 aaKnown RBP1.46□□□□□ -2.18
ECM5YMR176W QCR9P22289 66 aa1.46□□□□□ -2.18
ECM5YMR176W BET1P22804 142 aa1.46□□□□□ -2.18
ECM5YMR176W YCR050CP25630 102 aa1.46□□□□□ -2.18
ECM5YMR176W YEL028WP39989 153 aa1.46□□□□□ -2.18
ECM5YMR176W FIP1P45976 327 aa1.46□□□□□ -2.18
ECM5YMR176W RSM19P53733 91 aaPredicted RBP1.46□□□□□ -2.18
ECM5YMR176W HSK3P69852 69 aa1.46□□□□□ -2.18
ECM5YMR176W EAF6P47128 113 aa1.46□□□□□ -2.18
ECM5YMR176W MET31Q03081 177 aa1.46□□□□□ -2.18
ECM5YMR176W YDR102CQ03864 110 aa1.46□□□□□ -2.18
ECM5YMR176W SCS22Q6Q595 175 aa1.46□□□□□ -2.18
ECM5YMR176W SPO13P23624 291 aa1.45□□□□□ -2.18
ECM5YMR176W YRA2P36036 203 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
ECM5YMR176W YNR077CP53758 84 aa1.45□□□□□ -2.18
ECM5YMR176W GPI19Q04082 140 aa1.45□□□□□ -2.18
ECM5YMR176W YDR119W-AQ2V2P9 66 aa1.45□□□□□ -2.18
ECM5YMR176W RPL2AP0CX45 254 aaKnown RBP1.45□□□□□ -2.18
ECM5YMR176W RPL2BP0CX46 254 aaKnown RBP1.45□□□□□ -2.18
ECM5YMR176W SKI6P46948 246 aaPredicted RBP1.45□□□□□ -2.18
ECM5YMR176W YPL038W-AQ3E7B4 63 aa1.45□□□□□ -2.18
ECM5YMR176W IGO2Q9P305 131 aa1.45□□□□□ -2.18
ECM5YMR176W YFR054CP43622 192 aa1.45□□□□□ -2.18
ECM5YMR176W SHH4Q06236 168 aa1.45□□□□□ -2.18
ECM5YMR176W POC4Q12245 148 aaPredicted RBP1.45□□□□□ -2.18
ECM5YMR176W YAR029WP39549 74 aa1.45□□□□□ -2.18
ECM5YMR176W MZM1Q03429 123 aaPredicted RBP1.44□□□□□ -2.18
ECM5YMR176W KSH1Q8TGJ3 72 aa1.44□□□□□ -2.18
ECM5YMR176W AHT1P29589 182 aa1.44□□□□□ -2.18
ECM5YMR176W FZF1P32805 299 aa1.44□□□□□ -2.18
ECM5YMR176W PAM17P36147 197 aa1.44□□□□□ -2.18
ECM5YMR176W SFT2P38166 215 aa1.44□□□□□ -2.18
ECM5YMR176W YHR140WP38842 239 aa1.44□□□□□ -2.18
ECM5YMR176W LSM6Q06406 86 aaKnown RBP1.44□□□□□ -2.18
ECM5YMR176W RPL30P14120 105 aaKnown RBP1.43□□□□□ -2.18
ECM5YMR176W DSE2P38844 325 aa1.43□□□□□ -2.18
ECM5YMR176W YNL217WP40152 326 aa1.43□□□□□ -2.18
ECM5YMR176W YDR274CP87283 123 aa1.43□□□□□ -2.18
ECM5YMR176W UBC4P15731 148 aa1.43□□□□□ -2.18
ECM5YMR176W PAU7P39545 55 aa1.43□□□□□ -2.18
ECM5YMR176W SPG1P50088 95 aa1.43□□□□□ -2.18
ECM5YMR176W YDR381C-AQ3E6R5 114 aa1.43□□□□□ -2.18
ECM5YMR176W BEM2P39960 2167 aaKnown RBP1.43□□□□□ -2.18
ECM5YMR176W YSY6P38374 65 aa1.42□□□□□ -2.18
ECM5YMR176W MIX14Q04341 121 aa1.42□□□□□ -2.18
ECM5YMR176W FLO9P39712 1322 aa1.42□□□□□ -2.18
ECM5YMR176W YNL200CP40165 246 aaKnown RBP1.42□□□□□ -2.18
ECM5YMR176W YDR042CQ03205 200 aa1.42□□□□□ -2.18
ECM5YMR176W YMR295CQ03559 197 aa1.42□□□□□ -2.18
ECM5YMR176W COA2Q3E823 68 aa1.42□□□□□ -2.18
ECM5YMR176W BRP1P53194 125 aa1.42□□□□□ -2.18
ECM5YMR176W ATP19P81451 68 aa1.42□□□□□ -2.18
ECM5YMR176W YIL014C-AQ02598 104 aa1.42□□□□□ -2.18
ECM5YMR176W MRPL31P14063 131 aaPredicted RBP1.41□□□□□ -2.18
ECM5YMR176W TDA2P40045 126 aa1.41□□□□□ -2.18
ECM5YMR176W MPC3P53311 146 aa1.41□□□□□ -2.18
ECM5YMR176W PIR1Q03178 341 aa1.41□□□□□ -2.18
ECM5YMR176W YER187WP40102 141 aa1.41□□□□□ -2.18
ECM5YMR176W HSP12P22943 109 aaKnown RBP1.41□□□□□ -2.18
ECM5YMR176W FPR2P32472 135 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms