RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C SPI1P40092 148 aa3.51□□□□□ -1.85
EAR1YMR171C MRPL49P40858 161 aaPredicted RBP3.51□□□□□ -1.85
EAR1YMR171C KEG1P43614 200 aa3.51□□□□□ -1.85
EAR1YMR171C PBA1Q05778 276 aa3.51□□□□□ -1.85
EAR1YMR171C COA3Q3E7B2 85 aa3.51□□□□□ -1.85
EAR1YMR171C IGO2Q9P305 131 aa3.51□□□□□ -1.85
EAR1YMR171C ATX1P38636 73 aa3.5□□□□□ -1.85
EAR1YMR171C OXA1P39952 402 aa3.5□□□□□ -1.85
EAR1YMR171C DFM1Q12743 341 aaKnown RBP3.5□□□□□ -1.85
EAR1YMR171C YOR008C-AQ3E7B9 74 aa3.5□□□□□ -1.85
EAR1YMR171C TRP1P00912 224 aa3.49□□□□□ -1.85
EAR1YMR171C VAR1P02381 398 aa3.49□□□□□ -1.85
EAR1YMR171C MIC12P38341 106 aa3.49□□□□□ -1.85
EAR1YMR171C EOS1P53938 366 aa3.49□□□□□ -1.85
EAR1YMR171C YOR097CQ12274 175 aaPredicted RBP3.49□□□□□ -1.85
EAR1YMR171C PRP8P33334 2413 aaKnown RBP3.49□□□□□ -1.85
EAR1YMR171C TRA1P38811 3744 aa3.49□□□□□ -1.85
EAR1YMR171C LCB3P47013 409 aa3.49□□□□□ -1.85
EAR1YMR171C YLR194CQ05777 254 aa3.49□□□□□ -1.85
EAR1YMR171C LSM6Q06406 86 aaKnown RBP3.49□□□□□ -1.85
EAR1YMR171C HHF1P02309 103 aaKnown RBP3.48□□□□□ -1.85
EAR1YMR171C YHR022CP38763 256 aa3.48□□□□□ -1.85
EAR1YMR171C AIM11P87275 137 aa3.48□□□□□ -1.85
EAR1YMR171C PRM3Q08931 133 aa3.48□□□□□ -1.85
EAR1YMR171C CCW14O13547 238 aa3.47□□□□□ -1.85
EAR1YMR171C RPL43AP0CX25 92 aaKnown RBP3.47□□□□□ -1.85
EAR1YMR171C RPL43BP0CX26 92 aa3.47□□□□□ -1.85
EAR1YMR171C SPS100P13130 326 aa3.47□□□□□ -1.85
EAR1YMR171C OST2P46964 130 aa3.47□□□□□ -1.85
EAR1YMR171C YNR077CP53758 84 aa3.47□□□□□ -1.85
EAR1YMR171C AIM34Q03673 198 aa3.47□□□□□ -1.85
EAR1YMR171C HPA2Q06592 156 aa3.47□□□□□ -1.85
EAR1YMR171C MSA1Q08471 629 aa3.47□□□□□ -1.85
EAR1YMR171C CCW12Q12127 133 aa3.47□□□□□ -1.85
EAR1YMR171C SPO24Q3E752 67 aa3.47□□□□□ -1.85
EAR1YMR171C RPS8AP0CX39 200 aaKnown RBP3.46□□□□□ -1.85
EAR1YMR171C RPS8BP0CX40 200 aaKnown RBP3.46□□□□□ -1.85
EAR1YMR171C INO4P13902 151 aa3.46□□□□□ -1.85
EAR1YMR171C YEL067CP39978 195 aa3.46□□□□□ -1.85
EAR1YMR171C YNL194CP40169 301 aa3.46□□□□□ -1.85
EAR1YMR171C DCV1P43595 202 aa3.46□□□□□ -1.85
EAR1YMR171C YFR057WP43625 151 aa3.46□□□□□ -1.85
EAR1YMR171C YIP3P53633 176 aa3.46□□□□□ -1.85
EAR1YMR171C RRG8Q06109 277 aa3.46□□□□□ -1.85
EAR1YMR171C YBR200W-AQ3E755 54 aa3.46□□□□□ -1.85
EAR1YMR171C YIR020CP40575 100 aa3.46□□□□□ -1.86
EAR1YMR171C ABM1P47146 123 aa3.46□□□□□ -1.86
EAR1YMR171C Q0255P03881 472 aa3.45□□□□□ -1.86
EAR1YMR171C YDL022C-AP0C5L6 82 aa3.45□□□□□ -1.86
EAR1YMR171C ATP15P21306 62 aa3.45□□□□□ -1.86
EAR1YMR171C YER085CP40058 173 aa3.45□□□□□ -1.86
EAR1YMR171C PEX17P40155 199 aa3.45□□□□□ -1.86
EAR1YMR171C TOS8P53147 276 aa3.45□□□□□ -1.86
EAR1YMR171C TMC1Q08422 150 aaPredicted RBP3.45□□□□□ -1.86
EAR1YMR171C YNL146C-AQ3E7Z1 64 aa3.45□□□□□ -1.86
EAR1YMR171C YOR011W-AQ3E807 68 aa3.45□□□□□ -1.86
EAR1YMR171C RPL18AP0CX49 186 aaKnown RBP3.44□□□□□ -1.86
EAR1YMR171C RPL18BP0CX50 186 aaKnown RBP3.44□□□□□ -1.86
EAR1YMR171C COX14P39103 70 aa3.44□□□□□ -1.86
EAR1YMR171C VTC1P40046 129 aaRIP-Chip data3.44□□□□□ -1.86not detected
EAR1YMR171C YGR025WP53216 100 aa3.44□□□□□ -1.86
EAR1YMR171C PRM7Q12459 698 aa3.44□□□□□ -1.86
EAR1YMR171C YOL085CQ99345 113 aa3.44□□□□□ -1.86
EAR1YMR171C RPL28P02406 149 aaKnown RBP3.43□□□□□ -1.86
EAR1YMR171C RPL16AP26784 199 aaKnown RBP3.43□□□□□ -1.86
EAR1YMR171C RPL16BP26785 198 aaKnown RBP3.43□□□□□ -1.86
EAR1YMR171C VMA11P32842 164 aa3.43□□□□□ -1.86
EAR1YMR171C YJR146WP47174 117 aa3.43□□□□□ -1.86
EAR1YMR171C ISD11Q6Q560 94 aa3.43□□□□□ -1.86
EAR1YMR171C UTP20P35194 2493 aaKnown RBP3.43□□□□□ -1.86
EAR1YMR171C INO2P26798 304 aa3.43□□□□□ -1.86
EAR1YMR171C RPA12P32529 125 aaKnown RBP3.43□□□□□ -1.86
EAR1YMR171C YFL065CP43539 102 aa3.43□□□□□ -1.86
EAR1YMR171C VPS55P47111 140 aa3.43□□□□□ -1.86
EAR1YMR171C HOR7Q05827 59 aa3.43□□□□□ -1.86
EAR1YMR171C YPR203WQ08994 102 aa3.43□□□□□ -1.86
EAR1YMR171C MRPL23Q12487 163 aaPredicted RBP3.43□□□□□ -1.86
EAR1YMR171C YCR085WP25650 117 aa3.42□□□□□ -1.86
EAR1YMR171C UGX2P32772 223 aa3.42□□□□□ -1.86
EAR1YMR171C TOA2P32774 122 aa3.42□□□□□ -1.86
EAR1YMR171C YAR1P46683 200 aa3.42□□□□□ -1.86
EAR1YMR171C YJR085CP47131 105 aaKnown RBP3.42□□□□□ -1.86
EAR1YMR171C ABF2Q02486 183 aa3.42□□□□□ -1.86
EAR1YMR171C SPG4Q04438 115 aa3.42□□□□□ -1.86
EAR1YMR171C YLR042CQ07990 161 aa3.42□□□□□ -1.86
EAR1YMR171C COX10P21592 462 aa3.41□□□□□ -1.86
EAR1YMR171C YBR209WP38311 105 aa3.41□□□□□ -1.86
EAR1YMR171C SHU1P38751 150 aa3.41□□□□□ -1.86
EAR1YMR171C YHR130CP38834 111 aa3.41□□□□□ -1.86
EAR1YMR171C YER135CP40082 130 aa3.41□□□□□ -1.86
EAR1YMR171C FIP1P45976 327 aa3.41□□□□□ -1.86
EAR1YMR171C CAX4P53223 239 aa3.41□□□□□ -1.86
EAR1YMR171C YPR013CQ12145 317 aa3.41□□□□□ -1.86
EAR1YMR171C QCR8P08525 94 aa3.4□□□□□ -1.86
EAR1YMR171C MID2P36027 376 aa3.4□□□□□ -1.86
EAR1YMR171C YCH1P42937 148 aa3.4□□□□□ -1.86
EAR1YMR171C YMR244WQ04018 355 aa3.4□□□□□ -1.86
EAR1YMR171C URA2P07259 2214 aaKnown RBP3.4□□□□□ -1.86
EAR1YMR171C MRPS12P53732 153 aa3.39□□□□□ -1.87
EAR1YMR171C MRPS8Q03799 155 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms