RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YNL190WP53872 204 aa2.95□□□□□ -1.94
ECM16YMR128W YML122CQ03207 126 aa2.95□□□□□ -1.94
ECM16YMR128W YOR097CQ12274 175 aaPredicted RBP2.95□□□□□ -1.94
ECM16YMR128W YLR342W-AQ3E810 57 aa2.95□□□□□ -1.94
ECM16YMR128W KTI12P34253 313 aaKnown RBP2.94□□□□□ -1.94
ECM16YMR128W YER181CP40097 107 aa2.94□□□□□ -1.94
ECM16YMR128W YBL112CQ3E7Y4 105 aa2.94□□□□□ -1.94
ECM16YMR128W YBR144CP34215 104 aa2.94□□□□□ -1.94
ECM16YMR128W MRPL38P35996 138 aaPredicted RBP2.94□□□□□ -1.94
ECM16YMR128W ATX1P38636 73 aa2.94□□□□□ -1.94
ECM16YMR128W IGO2Q9P305 131 aa2.94□□□□□ -1.94
ECM16YMR128W COX10P21592 462 aa2.94□□□□□ -1.94
ECM16YMR128W TOA2P32774 122 aa2.94□□□□□ -1.94
ECM16YMR128W YHL037CP38733 133 aa2.94□□□□□ -1.94
ECM16YMR128W AIM11P87275 137 aa2.94□□□□□ -1.94
ECM16YMR128W YER039C-AP0CD97 72 aa2.93□□□□□ -1.94
ECM16YMR128W RPL32P38061 130 aaKnown RBP2.93□□□□□ -1.94
ECM16YMR128W YBR121C-AP0C5L4 52 aa2.93□□□□□ -1.94
ECM16YMR128W ATP15P21306 62 aa2.93□□□□□ -1.94
ECM16YMR128W RPA12P32529 125 aaKnown RBP2.93□□□□□ -1.94
ECM16YMR128W URA2P07259 2214 aaKnown RBP2.92□□□□□ -1.94
ECM16YMR128W LDB16P25587 256 aa2.92□□□□□ -1.94
ECM16YMR128W TOS6P48560 102 aa2.92□□□□□ -1.94
ECM16YMR128W ALG13P53178 202 aa2.92□□□□□ -1.94
ECM16YMR128W MIC12P38341 106 aa2.92□□□□□ -1.94
ECM16YMR128W DSE2P38844 325 aa2.92□□□□□ -1.94
ECM16YMR128W SPI1P40092 148 aa2.92□□□□□ -1.94
ECM16YMR128W YBR056W-AI2HB52 66 aa2.92□□□□□ -1.94
ECM16YMR128W MRPL20P22354 195 aaPredicted RBP2.92□□□□□ -1.94
ECM16YMR128W YNL194CP40169 301 aa2.92□□□□□ -1.94
ECM16YMR128W LSM6Q06406 86 aaKnown RBP2.92□□□□□ -1.94
ECM16YMR128W YPR013CQ12145 317 aa2.92□□□□□ -1.94
ECM16YMR128W MRPL24P36525 258 aaPredicted RBP2.91□□□□□ -1.94
ECM16YMR128W HPA2Q06592 156 aa2.91□□□□□ -1.94
ECM16YMR128W RPL28P02406 149 aaKnown RBP2.91□□□□□ -1.94
ECM16YMR128W RPS8AP0CX39 200 aaKnown RBP2.91□□□□□ -1.94
ECM16YMR128W RPS8BP0CX40 200 aaKnown RBP2.91□□□□□ -1.94
ECM16YMR128W NRG2P38082 220 aa2.91□□□□□ -1.94
ECM16YMR128W YIP1P53039 248 aa2.91□□□□□ -1.94
ECM16YMR128W MRPS12P53732 153 aa2.91□□□□□ -1.94
ECM16YMR128W YHR130CP38834 111 aa2.9□□□□□ -1.94
ECM16YMR128W YNL046WP53956 172 aa2.9□□□□□ -1.94
ECM16YMR128W YAL063C-AQ3E791 96 aa2.9□□□□□ -1.94
ECM16YMR128W SPS100P13130 326 aa2.9□□□□□ -1.95
ECM16YMR128W RPL16AP26784 199 aaKnown RBP2.9□□□□□ -1.95
ECM16YMR128W MRPL49P40858 161 aaPredicted RBP2.9□□□□□ -1.95
ECM16YMR128W FIP1P45976 327 aa2.9□□□□□ -1.95
ECM16YMR128W VPS55P47111 140 aa2.9□□□□□ -1.95
ECM16YMR128W RRG8Q06109 277 aa2.9□□□□□ -1.95
ECM16YMR128W YIA6P40556 373 aa2.89□□□□□ -1.95
ECM16YMR128W YFR035CP43608 114 aa2.89□□□□□ -1.95
ECM16YMR128W YGL260WP53056 76 aa2.89□□□□□ -1.95
ECM16YMR128W INO2P26798 304 aa2.89□□□□□ -1.95
ECM16YMR128W YGL088WP53151 121 aa2.89□□□□□ -1.95
ECM16YMR128W YLR194CQ05777 254 aa2.89□□□□□ -1.95
ECM16YMR128W YBR200W-AQ3E755 54 aa2.89□□□□□ -1.95
ECM16YMR128W UBC5P15732 148 aa2.89□□□□□ -1.95
ECM16YMR128W POR2P40478 281 aa2.89□□□□□ -1.95
ECM16YMR128W YGR219WP53307 113 aa2.89□□□□□ -1.95
ECM16YMR128W YOR008C-AQ3E7B9 74 aa2.89□□□□□ -1.95
ECM16YMR128W IES6P32617 166 aa2.88□□□□□ -1.95
ECM16YMR128W RPL18AP0CX49 186 aaKnown RBP2.88□□□□□ -1.95
ECM16YMR128W RPL18BP0CX50 186 aaKnown RBP2.88□□□□□ -1.95
ECM16YMR128W YHR022CP38763 256 aa2.88□□□□□ -1.95
ECM16YMR128W YNL217WP40152 326 aa2.88□□□□□ -1.95
ECM16YMR128W DCV1P43595 202 aa2.88□□□□□ -1.95
ECM16YMR128W YJR146WP47174 117 aa2.88□□□□□ -1.95
ECM16YMR128W YOR011W-AQ3E807 68 aa2.87□□□□□ -1.95
ECM16YMR128W RPL16BP26785 198 aaKnown RBP2.87□□□□□ -1.95
ECM16YMR128W CAX4P53223 239 aa2.87□□□□□ -1.95
ECM16YMR128W TMC1Q08422 150 aaPredicted RBP2.87□□□□□ -1.95
ECM16YMR128W RPL15AP05748 204 aaKnown RBP2.87□□□□□ -1.95
ECM16YMR128W ABF2Q02486 183 aa2.87□□□□□ -1.95
ECM16YMR128W YOR034C-AQ3E735 80 aa2.87□□□□□ -1.95
ECM16YMR128W YKL183C-AQ3E765 70 aa2.86□□□□□ -1.95
ECM16YMR128W PRP8P33334 2413 aaKnown RBP2.86□□□□□ -1.95
ECM16YMR128W YGR039WP53225 103 aa2.86□□□□□ -1.95
ECM16YMR128W YLR042CQ07990 161 aa2.86□□□□□ -1.95
ECM16YMR128W YBR209WP38311 105 aa2.85□□□□□ -1.95
ECM16YMR128W YER135CP40082 130 aa2.85□□□□□ -1.95
ECM16YMR128W YDR119W-AQ2V2P9 66 aa2.85□□□□□ -1.95
ECM16YMR128W YCL021W-AQ96VH3 125 aa2.85□□□□□ -1.95
ECM16YMR128W Q0255P03881 472 aa2.85□□□□□ -1.95
ECM16YMR128W RPL42AP0CX27 106 aaKnown RBP2.85□□□□□ -1.95
ECM16YMR128W RPL42BP0CX28 106 aaKnown RBP2.85□□□□□ -1.95
ECM16YMR128W KRE1P17260 313 aa2.85□□□□□ -1.95
ECM16YMR128W KRE9P39005 276 aa2.85□□□□□ -1.95
ECM16YMR128W VMA11P32842 164 aa2.84□□□□□ -1.95
ECM16YMR128W HOT13P36078 116 aa2.84□□□□□ -1.95
ECM16YMR128W YEL008WP40001 126 aa2.84□□□□□ -1.96
ECM16YMR128W SIM1P40472 476 aa2.84□□□□□ -1.96
ECM16YMR128W CWP2P43497 92 aa2.84□□□□□ -1.96
ECM16YMR128W CCW12Q12127 133 aa2.84□□□□□ -1.96
ECM16YMR128W YFL041W-AQ3E817 63 aa2.84□□□□□ -1.96
ECM16YMR128W YHR139C-AO13536 103 aa2.83□□□□□ -1.96
ECM16YMR128W TRP1P00912 224 aa2.83□□□□□ -1.96
ECM16YMR128W SKI6P46948 246 aaPredicted RBP2.83□□□□□ -1.96
ECM16YMR128W YDR381C-AQ3E6R5 114 aa2.83□□□□□ -1.96
ECM16YMR128W PBI2P0CT04 75 aaKnown RBP2.83□□□□□ -1.96
ECM16YMR128W MIG3P39943 394 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms