RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	RRT15	Q3E811	62 aa		0.84	□□□□□ -2.27
PKR1	YMR123W	COA2	Q3E823	68 aa		0.84	□□□□□ -2.27
PKR1	YMR123W	YLL066W-B	Q8TGJ7	56 aa		0.84	□□□□□ -2.27
PKR1	YMR123W	YAR023C	D6VPM8	179 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	DDR48	P18899	430 aa	Known RBP	0.83	□□□□□ -2.28
PKR1	YMR123W	DER1	P38307	211 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	SLM6	P38343	150 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	YHL018W	P38744	120 aa	Predicted RBP	0.83	□□□□□ -2.28
PKR1	YMR123W	IPI1	P38803	334 aa	Predicted RBP	0.83	□□□□□ -2.28
PKR1	YMR123W	YEL008W	P40001	126 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	YMR141C	P40211	102 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	YGR269W	P40326	108 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	SWM2	P40342	146 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	RPL37A	P49166	88 aa	Known RBP	0.83	□□□□□ -2.28
PKR1	YMR123W	RRT7	Q07829	113 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	FIT2	Q08906	153 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	YLR146W-A	Q2V2P1	62 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	YHR213W-A	Q8TGT4	77 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	IGO2	Q9P305	131 aa		0.83	□□□□□ -2.28
PKR1	YMR123W	RPL33A	P05744	107 aa	Known RBP	0.82	□□□□□ -2.28
PKR1	YMR123W	HSP12	P22943	109 aa	Known RBP	0.82	□□□□□ -2.28
PKR1	YMR123W	SPT14	P32363	452 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	RPL14A	P36105	138 aa	Known RBP	0.82	□□□□□ -2.28
PKR1	YMR123W	RPL14B	P38754	138 aa	Known RBP	0.82	□□□□□ -2.28
PKR1	YMR123W	YEA6	P39953	335 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	YEL067C	P39978	195 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	SPI1	P40092	148 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	HUA1	P40325	198 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	LCL1	Q02786	101 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	AIM34	Q03673	198 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	RAV2	Q03956	351 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	YMR082C	Q04276	118 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	YMR253C	Q04835	414 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	FYV12	Q08559	129 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	YLR307C-A	Q3E825	87 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	YML100W-A	Q8TGT0	57 aa		0.82	□□□□□ -2.28
PKR1	YMR123W	YPR010C-A	A5Z2X5	72 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	SPS2	P08459	502 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YER188C-A	P0C0V2	99 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	SEC59	P20048	519 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	QCR9	P22289	66 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YCR023C	P25351	611 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	PAM17	P36147	197 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YBR242W	P38331	238 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	TRS20	P38334	175 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	POG1	P40473	351 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YFL019C	P43576	117 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	BRP1	P53194	125 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	ERI1	P62651	68 aa	Known RBP	0.81	□□□□□ -2.28
PKR1	YMR123W	DAD4	P69851	72 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YDR366C	P87287	132 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	AVO2	Q04749	426 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YLR042C	Q07990	161 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YDR029W	Q12111	104 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YDR010C	Q12426	110 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	YBR200W-A	Q3E755	54 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	PCC1	Q3E833	88 aa		0.81	□□□□□ -2.28
PKR1	YMR123W	COX8	P04039	78 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	TIR1	P10863	254 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	HYP2	P23301	157 aa	Known RBP	0.8	□□□□□ -2.28
PKR1	YMR123W	AHT1	P29589	182 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	YBR013C	P38215	129 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	YAL064W	P39711	94 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	YER134C	P40081	178 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	CGR1	P53188	120 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	SNA2	P56508	79 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	PMP3	P87284	55 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	UPS3	Q04006	179 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	YMR320W	Q04897	101 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	FCF2	Q12035	217 aa	Predicted RBP	0.8	□□□□□ -2.28
PKR1	YMR123W	DAD1	Q12248	94 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	YLR342W-A	Q3E810	57 aa		0.8	□□□□□ -2.28
PKR1	YMR123W	UBC5	P15732	148 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	YKR041W	P36134	250 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	AME1	P38313	324 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	YHR173C	P38864	112 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	YIL163C	P40448	117 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	AIM19	P40502	157 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	CIN5	P40917	295 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	YFL065C	P43539	102 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	YOR015W	Q12169	119 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	YMR122W-A	Q3E842	84 aa		0.79	□□□□□ -2.28
PKR1	YMR123W	ECM12	O13529	151 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	UBI4	P0CG63	381 aa	Known RBP	0.78	□□□□□ -2.28
PKR1	YMR123W	ACP1	P32463	125 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	UTP11	P34247	250 aa	Predicted RBP	0.78	□□□□□ -2.28
PKR1	YMR123W	YBR090C	P38253	122 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	YBR292C	P38357	123 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	THG1	P53215	237 aa	Known RBP	0.78	□□□□□ -2.28
PKR1	YMR123W	YLR194C	Q05777	254 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	YHR007C-A	Q07074	71 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	YOR105W	Q08504	108 aa		0.78	□□□□□ -2.28
PKR1	YMR123W	MRPL31	P14063	131 aa	Predicted RBP	0.77	□□□□□ -2.29
PKR1	YMR123W	MRP49	P32388	137 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	SPC25	P40014	221 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	CWP2	P43497	92 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	YGL149W	P53116	101 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	YMR295C	Q03559	197 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	GPI19	Q04082	140 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	TVP18	Q04767	167 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 171.2 ms