RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A MRP49P32388 137 aa9.17□□□□□ -0.94
LSM3YLR438C-A PAU16P35994 123 aa9.17□□□□□ -0.94
LSM3YLR438C-A AIM29P36154 155 aa9.17□□□□□ -0.94
LSM3YLR438C-A YJR146WP47174 117 aa9.17□□□□□ -0.94
LSM3YLR438C-A YMR122W-AQ3E842 84 aa9.17□□□□□ -0.94
LSM3YLR438C-A APS1P35181 156 aa9.16□□□□□ -0.94
LSM3YLR438C-A YGL088WP53151 121 aa9.16□□□□□ -0.94
LSM3YLR438C-A TRP1P00912 224 aa9.15□□□□□ -0.94
LSM3YLR438C-A CGR1P53188 120 aa9.13□□□□□ -0.95
LSM3YLR438C-A YCL021W-AQ96VH3 125 aa9.13□□□□□ -0.95
LSM3YLR438C-A FYV4P38783 130 aaPredicted RBP9.12□□□□□ -0.95
LSM3YLR438C-A YLR050CQ12155 161 aaKnown RBP9.12□□□□□ -0.95
LSM3YLR438C-A RPL31AP0C2H8 113 aaKnown RBP9.11□□□□□ -0.95
LSM3YLR438C-A YMR103CQ04436 120 aa9.11□□□□□ -0.95
LSM3YLR438C-A YPR010C-AA5Z2X5 72 aa9.1□□□□□ -0.95
LSM3YLR438C-A YLR112WQ12130 139 aa9.1□□□□□ -0.95
LSM3YLR438C-A TPT1Q12272 230 aaKnown RBP9.1□□□□□ -0.95
LSM3YLR438C-A COA3Q3E7B2 85 aa9.1□□□□□ -0.95
LSM3YLR438C-A YER085CP40058 173 aa9.08□□□□□ -0.96
LSM3YLR438C-A HAC1P41546 238 aa9.08□□□□□ -0.96
LSM3YLR438C-A SCS22Q6Q595 175 aa9.08□□□□□ -0.96
LSM3YLR438C-A RPL33AP05744 107 aaKnown RBP9.07□□□□□ -0.96
LSM3YLR438C-A FUN14P18411 198 aa9.07□□□□□ -0.96
LSM3YLR438C-A SVP26P38869 228 aa9.07□□□□□ -0.96
LSM3YLR438C-A YEL008WP40001 126 aa9.07□□□□□ -0.96
LSM3YLR438C-A RPL33BP41056 107 aaKnown RBP9.07□□□□□ -0.96
LSM3YLR438C-A LSM8P47093 109 aaKnown RBP9.07□□□□□ -0.96
LSM3YLR438C-A PBA1Q05778 276 aa9.07□□□□□ -0.96
LSM3YLR438C-A RTC6O14464 93 aa9.06□□□□□ -0.96
LSM3YLR438C-A ERG28P40030 148 aa9.06□□□□□ -0.96
LSM3YLR438C-A RPL11AP0C0W9 174 aaKnown RBP9.04□□□□□ -0.96
LSM3YLR438C-A YKL070WP36087 169 aa9.04□□□□□ -0.96
LSM3YLR438C-A YAR029WP39549 74 aa9.04□□□□□ -0.96
LSM3YLR438C-A NUP42P49686 430 aaKnown RBP9.04□□□□□ -0.96
LSM3YLR438C-A RPL11BQ3E757 174 aaPredicted RBP9.04□□□□□ -0.96
LSM3YLR438C-A ATP15P21306 62 aa9.03□□□□□ -0.96
LSM3YLR438C-A YMR320WQ04897 101 aa9.03□□□□□ -0.96
LSM3YLR438C-A DIF1O13577 133 aa9.02□□□□□ -0.97
LSM3YLR438C-A MSL1P40567 111 aaPredicted RBP9.02□□□□□ -0.97
LSM3YLR438C-A YPL261CQ08976 102 aa9.02□□□□□ -0.97
LSM3YLR438C-A YLL066W-BQ8TGJ7 56 aa9.02□□□□□ -0.97
LSM3YLR438C-A SEC11P15367 167 aa9.01□□□□□ -0.97
LSM3YLR438C-A ENV10Q99382 181 aa9.01□□□□□ -0.97
LSM3YLR438C-A YGL230CP53074 147 aa9□□□□□ -0.97
LSM3YLR438C-A FYV7Q12247 151 aa9□□□□□ -0.97
LSM3YLR438C-A BET5Q03630 159 aa8.99□□□□□ -0.97
LSM3YLR438C-A RPL32P38061 130 aaKnown RBP8.98□□□□□ -0.97
LSM3YLR438C-A AIM11P87275 137 aa8.98□□□□□ -0.97
LSM3YLR438C-A DFM1Q12743 341 aaKnown RBP8.98□□□□□ -0.97
LSM3YLR438C-A YCR007CP25354 239 aa8.97□□□□□ -0.97
LSM3YLR438C-A YKL044WP36092 106 aa8.97□□□□□ -0.97
LSM3YLR438C-A YMR295CQ03559 197 aa8.96□□□□□ -0.98
LSM3YLR438C-A NAT5Q08689 176 aa8.96□□□□□ -0.98
LSM3YLR438C-A MRPL44P19956 98 aa8.95□□□□□ -0.98
LSM3YLR438C-A YDL157CQ12082 118 aa8.95□□□□□ -0.98
LSM3YLR438C-A RRT15Q3E811 62 aa8.95□□□□□ -0.98
LSM3YLR438C-A YDR115WQ04598 105 aa8.94□□□□□ -0.98
LSM3YLR438C-A YLR194CQ05777 254 aa8.94□□□□□ -0.98
LSM3YLR438C-A ATP5P09457 212 aa8.93□□□□□ -0.98
LSM3YLR438C-A YBR219CP38317 127 aa8.93□□□□□ -0.98
LSM3YLR438C-A SHU1P38751 150 aa8.93□□□□□ -0.98
LSM3YLR438C-A YPL073CP40323 161 aa8.93□□□□□ -0.98
LSM3YLR438C-A YAR023CD6VPM8 179 aa8.92□□□□□ -0.98
LSM3YLR438C-A PEX17P40155 199 aa8.92□□□□□ -0.98
LSM3YLR438C-A YMR175W-AQ3E766 64 aa8.92□□□□□ -0.98
LSM3YLR438C-A YKR041WP36134 250 aa8.91□□□□□ -0.98
LSM3YLR438C-A RPC10P40422 70 aa8.91□□□□□ -0.98
LSM3YLR438C-A VTS1Q08831 523 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
LSM3YLR438C-A RPL18AP0CX49 186 aaKnown RBP8.9□□□□□ -0.98
LSM3YLR438C-A RPL18BP0CX50 186 aaKnown RBP8.9□□□□□ -0.98
LSM3YLR438C-A YPR195CQ06594 109 aa8.9□□□□□ -0.98
LSM3YLR438C-A PPT2Q12036 173 aa8.9□□□□□ -0.98
LSM3YLR438C-A SCM4P32564 187 aa8.89□□□□□ -0.99
LSM3YLR438C-A YAL064WP39711 94 aa8.89□□□□□ -0.99
LSM3YLR438C-A SAE3P89114 91 aa8.88□□□□□ -0.99
LSM3YLR438C-A YDL022C-AP0C5L6 82 aa8.87□□□□□ -0.99
LSM3YLR438C-A ANB1P19211 157 aa8.87□□□□□ -0.99
LSM3YLR438C-A RPF1P38805 295 aaKnown RBP8.87□□□□□ -0.99
LSM3YLR438C-A YDL085C-AQ3E7B7 68 aaKnown RBP8.87□□□□□ -0.99
LSM3YLR438C-A QCR8P08525 94 aa8.86□□□□□ -0.99
LSM3YLR438C-A IGO2Q9P305 131 aa8.86□□□□□ -0.99
LSM3YLR438C-A CIN5P40917 295 aa8.85□□□□□ -0.99
LSM3YLR438C-A COX14P39103 70 aa8.84□□□□□ -0.99
LSM3YLR438C-A ADH1P00330 348 aaKnown RBP8.83□□□□□ -1
LSM3YLR438C-A HAP3P13434 144 aa8.83□□□□□ -1
LSM3YLR438C-A YBL081WP38180 368 aaKnown RBP8.83□□□□□ -1
LSM3YLR438C-A RPL28P02406 149 aaKnown RBP8.82□□□□□ -1
LSM3YLR438C-A TOA2P32774 122 aa8.82□□□□□ -1
LSM3YLR438C-A VTC1P40046 129 aaRIP-Chip data8.82□□□□□ -1not detected
LSM3YLR438C-A YDL241WQ07738 123 aa8.82□□□□□ -1
LSM3YLR438C-A YAL065CO13511 128 aa8.81□□□□□ -1
LSM3YLR438C-A SNA2P56508 79 aa8.8□□□□□ -1
LSM3YLR438C-A PAU23Q07987 124 aa8.8□□□□□ -1
LSM3YLR438C-A PAU17Q12370 124 aa8.8□□□□□ -1
LSM3YLR438C-A CDC43P18898 376 aa8.79□□□□□ -1
LSM3YLR438C-A YEL067CP39978 195 aa8.79□□□□□ -1
LSM3YLR438C-A MRPS12P53732 153 aa8.78□□□□□ -1
LSM3YLR438C-A MRP10O75012 95 aa8.77□□□□□ -1.01
LSM3YLR438C-A YNR077CP53758 84 aa8.77□□□□□ -1.01
LSM3YLR438C-A SMD1Q02260 146 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 194.9 ms